RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 ROBO3Q96MS0 1386 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 XDHP47989 1333 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 LDHBP07195 334 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SKILP12757 684 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TNNT1P13805 278 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 GRIN1Q05586 938 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NFIXQ14938 502 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CCDC178Q5BJE1 867 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TRAPPC3LQ5T215 181 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ZNF804AQ7Z570 1209 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TXNRD3Q86VQ6 643 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TRIML1Q8N9V2 468 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TNFRSF25Q93038 417 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PDCL3Q9H2J4 239 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 DACH1Q9UI36 760 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 MAN1B1Q9UKM7 699 aa10.7□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FAM205CA6NFA0 338 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TSPY2A6NKD2 308 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FOXN1O15353 648 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 POLR2DO15514 142 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NRDCO43847 1150 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 LDHCP07864 332 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PRR29P0C7W0 189 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ADRA2BP18089 450 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ATP2B1P20020 1258 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 LMOD1P29536 600 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 KIF5BP33176 963 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 KCNJ6P48051 423 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SARSP49591 514 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 EVX2Q03828 476 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SPECC1Q5M775 1068 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NT5DC1Q5TFE4 455 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 C12orf60Q5U649 245 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FOXP4Q8IVH2 680 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SRBD1Q8N5C6 995 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CNBD1Q8NA66 436 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 MLKLQ8NB16 471 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ANKS1AQ92625 1134 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SMARCE1Q969G3 411 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FERMT2Q96AC1 680 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CCDC34Q96HJ3 373 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CSRNP2Q9H175 543 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 HSD3B7Q9H2F3 369 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 MCM9Q9NXL9 1143 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ANKIB1Q9P2G1 1089 aa10.69□□□□□ -0.7
CDK5RAP3-208ENST00000578525 hCG_1642624A0A1W2PR95 340 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 BAG3O95817 575 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 USP17L8P0C7I0 530 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SCG2P13521 617 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ATP2B4P23634 1241 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 USP5P45974 858 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PPP4CP60510 307 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 MORC3Q14149 939 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NPY5RQ15761 445 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TTC38Q5R3I4 469 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FAM196AQ6ZSG2 479 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 DGKHQ86XP1 1220 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CERS3Q8IU89 383 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 C16orf45Q96MC5 204 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 KAT14Q9H8E8 782 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PAXBP1Q9Y5B6 917 aa10.68□□□□□ -0.7
CDK5RAP3-208ENST00000578525 KIF2AO00139 706 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NMT2O60551 498 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SERPINC1P01008 464 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ATP1A3P13637 1013 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SFPQP23246 707 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TRAPPC10P48553 1259 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 GNAQP50148 359 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 UBASH3AP57075 661 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 NLRP5P59047 1200 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 GRM4Q14833 912 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PFKFB3Q16875 520 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 EARS2Q5JPH6 523 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 FAM182BQ5T319 152 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CEP135Q66GS9 1140 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 RCSD1Q6JBY9 416 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PRR5LQ6MZQ0 368 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 ARMCX5Q6P1M9 558 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SH3RF1Q7Z6J0 888 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CCAR2Q8N163 923 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 SH3RF3Q8TEJ3 882 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 RPGRQ92834 1020 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 GJD4Q96KN9 370 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 JAG2Q9Y219 1238 aa10.67□□□□□ -0.7
CDK5RAP3-208ENST00000578525 UBR3Q6ZT12 1888 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 USP27XA6NNY8 438 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CTIFO43310 598 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 BMP6P22004 513 aa10.66□□□□□ -0.7
CDK5RAP3-208ENST00000578525 CALML3P27482 149 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms