RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
GGA3-205ENST00000578348 FGRP09769 529 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 RESP18Q5W5W9 173 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 TXNRD3Q86VQ6 643 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 METTL16Q86W50 562 aaKnown RBP13.09□□□□□ -0.31
GGA3-205ENST00000578348 WDR66Q8TBY9 1149 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
GGA3-205ENST00000578348 SERPINB2P05120 415 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 PRDX5P30044 214 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 SEC23AQ15436 765 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 LONRF3Q496Y0 759 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 TAF3Q5VWG9 929 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
GGA3-205ENST00000578348 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 KRT222Q8N1A0 295 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 CNNM3Q8NE01 707 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 ZKSCAN3Q9BRR0 538 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 HSP90AA4PQ58FG1 418 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 ZNF804AQ7Z570 1209 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 DZIP1Q86YF9 867 aaKnown RBP13.08□□□□□ -0.32
GGA3-205ENST00000578348 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
GGA3-205ENST00000578348 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.08□□□□□ -0.32
GGA3-205ENST00000578348 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 FANCLQ9NW38 375 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 DNAI1Q9UI46 699 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
GGA3-205ENST00000578348 TNKSO95271 1327 aa13.07□□□□□ -0.32
GGA3-205ENST00000578348 TMEM232C9JQI7 657 aa13.07□□□□□ -0.32
GGA3-205ENST00000578348 GABPB1Q06547 395 aaPredicted RBP13.07□□□□□ -0.32
GGA3-205ENST00000578348 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
GGA3-205ENST00000578348 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
GGA3-205ENST00000578348 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
GGA3-205ENST00000578348 STK11IPQ8N1F8 1099 aa13.07□□□□□ -0.32
GGA3-205ENST00000578348 AATFQ9NY61 560 aaKnown RBP eCLIP13.07□□□□□ -0.32
GGA3-205ENST00000578348 ARPP21Q9UBL0 812 aaPredicted RBP13.07□□□□□ -0.32
GGA3-205ENST00000578348 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
GGA3-205ENST00000578348 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 FOXN1O15353 648 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 ORC4O43929 436 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 CUTAO60888 179 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 TRIM37O94972 964 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 TOP1P11387 765 aaKnown RBP13.06□□□□□ -0.32
GGA3-205ENST00000578348 ATP2B4P23634 1241 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 ETF1P62495 437 aaKnown RBP13.06□□□□□ -0.32
GGA3-205ENST00000578348 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 FOXP4Q8IVH2 680 aaPredicted RBP13.06□□□□□ -0.32
GGA3-205ENST00000578348 ZSCAN10Q96SZ4 725 aaPredicted RBP13.06□□□□□ -0.32
GGA3-205ENST00000578348 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
GGA3-205ENST00000578348 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
GGA3-205ENST00000578348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
GGA3-205ENST00000578348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.06□□□□□ -0.325e-7■■■□□ 15.3
GGA3-205ENST00000578348 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 USP17L21D6R901 530 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 CCP110O43303 1012 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 GSTO1P78417 241 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 ZNF446Q9NWS9 450 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 LRRC37AA6NMS7 1700 aa13.06□□□□□ -0.32
GGA3-205ENST00000578348 CYP2D7A0A087X1C5 515 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 TUBB4AP04350 444 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 LDHBP07195 334 aaKnown RBP13.05□□□□□ -0.32
GGA3-205ENST00000578348 NT5C2P49902 561 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 GPSM2P81274 684 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 PDE4BQ07343 736 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
GGA3-205ENST00000578348 FANCBQ8NB91 859 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 DEXIO95424 95 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 BMP6P22004 513 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 HOXA10P31260 410 aaPredicted RBP13.05□□□□□ -0.32
GGA3-205ENST00000578348 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 NOSTRINQ8IVI9 506 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
GGA3-205ENST00000578348 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
GGA3-205ENST00000578348 TMX1Q9H3N1 280 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
GGA3-205ENST00000578348 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 BBOX1O75936 387 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 CALM1P0DP23 149 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 CALM2P0DP24 149 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 CALM3P0DP25 149 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 H2AFXP16104 143 aaPredicted RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 GRIN1Q05586 938 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 DDR1Q08345 913 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 TXNRD1Q16881 649 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 FAM177A1Q8N128 213 aaPredicted RBP13.04□□□□□ -0.32
GGA3-205ENST00000578348 CCDC82Q8N4S0 544 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 NUP133Q8WUM0 1156 aa13.04□□□□□ -0.32
GGA3-205ENST00000578348 CRAMP1Q96RY5 1269 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms