RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 SMC1AQ14683 1233 aaKnown RBP7.94□□□□□ -1.14
KRT39-203ENST00000578078 RABL6Q3YEC7 729 aaPredicted RBP7.94□□□□□ -1.14
KRT39-203ENST00000578078 KIF6Q6ZMV9 814 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 TADA2BQ86TJ2 420 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 UNC5CLQ8IV45 518 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 FMNL3Q8IVF7 1028 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 REXO1L1PQ8IX06 675 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 GPR161Q8N6U8 529 aaKnown RBP7.94□□□□□ -1.14
KRT39-203ENST00000578078 GPATCH11Q8N954 259 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 HNRNPLLQ8WVV9 542 aaKnown RBP7.94□□□□□ -1.14
KRT39-203ENST00000578078 RUFY2Q8WXA3 655 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 ITFG2Q969R8 447 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 SIL1Q9H173 461 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 GPSM3Q9Y4H4 160 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 BCL9O00512 1426 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 HIP1O00291 1037 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 SASH1O94885 1247 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 MAP4K4O95819 1239 aaPredicted RBP7.93□□□□□ -1.14
KRT39-203ENST00000578078 CASTP20810 708 aaKnown RBP7.93□□□□□ -1.14
KRT39-203ENST00000578078 OAS2P29728 719 aaKnown RBP7.93□□□□□ -1.14
KRT39-203ENST00000578078 MAPK8P45983 427 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 DDR1Q08345 913 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 TTLL7Q6ZT98 887 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 CCAR2Q8N163 923 aaKnown RBP7.93□□□□□ -1.14
KRT39-203ENST00000578078 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 COL26A1Q96A83 441 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 EVI5LQ96CN4 794 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 DDX11Q96FC9 970 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 CITED4Q96RK1 184 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 PRKD2Q9BZL6 878 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 ORC3Q9UBD5 711 aaPredicted RBP7.93□□□□□ -1.14
KRT39-203ENST00000578078 ADAM21Q9UKJ8 722 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 FAN1Q9Y2M0 1017 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 PCDHB9Q9Y5E1 797 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.93□□□□□ -1.14
KRT39-203ENST00000578078 MYH3P11055 1940 aa7.93□□□□□ -1.14
KRT39-203ENST00000578078 CCDC151A5D8V7 595 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 POTEB2H3BUK9 544 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 H7C1W4 665 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 EIF3JO75822 258 aaKnown RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 STK10O94804 968 aaKnown RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 F12P00748 615 aaPredicted RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 PLCB3Q01970 1234 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 EHHADHQ08426 723 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 TTLL5Q6EMB2 1281 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 ASTLQ6HA08 431 aaPredicted RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 MCF2L2Q86YR7 1114 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 OTUD6BQ8N6M0 293 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 MORC4Q8TE76 937 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 PIGBQ92521 554 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 GTF3C6Q969F1 213 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 CHMP4CQ96CF2 233 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 ARFGAP3Q9NP61 516 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 DDX19AQ9NUU7 478 aaKnown RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 DNAI1Q9UI46 699 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 THRAP3Q9Y2W1 955 aaKnown RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 NUP98P52948 1817 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 CCDC194A0A1B0GVG4 234 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 CTAGE5O15320 804 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 AP5Z1O43299 807 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 ZSCAN22P10073 491 aaPredicted RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 RFX5P48382 616 aaPredicted RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 GYS2P54840 703 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 CASP7P55210 303 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 BRD3Q15059 726 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 ARHGAP29Q52LW3 1261 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 C3orf67Q6ZVT6 689 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 EAF2Q96CJ1 260 aaPredicted RBP7.92□□□□□ -1.14
KRT39-203ENST00000578078 DMRTB1Q96MA1 342 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 TRERF1Q96PN7 1200 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 PCDH12Q9NPG4 1184 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 ST7Q9NRC1 585 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 CLIP2Q9UDT6 1046 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 LCMT1Q9UIC8 334 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 ASAP1Q9ULH1 1129 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 CHMP3Q9Y3E7 222 aa7.92□□□□□ -1.14
KRT39-203ENST00000578078 C19orf67A6NJJ6 358 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 A6NNZ2 444 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 MAP2K7O14733 419 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 TOM1O60784 492 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 PPFIA4O75335 1185 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 LGR5O75473 907 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 ADAMTS2O95450 1211 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 TBC1D8O95759 1140 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 XRCC5P13010 732 aaKnown RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 NEK4P51957 841 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 ICA1Q05084 483 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 PTPN12Q05209 780 aaKnown RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 NEDD9Q14511 834 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 LRRFIP1Q32MZ4 808 aaKnown RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 TUBB8Q3ZCM7 444 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 DNAJC21Q5F1R6 531 aaKnown RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 CC2D1AQ6P1N0 951 aaPredicted RBP7.91□□□□□ -1.14
KRT39-203ENST00000578078 LMBR1LQ6UX01 489 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 FCHSD1Q86WN1 690 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
KRT39-203ENST00000578078 CCDC150Q8NCX0 1101 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms