RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 GLRX3O76003 335 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 CYP2E1P05181 493 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 RTP1P59025 263 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 ANO1Q5XXA6 986 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 GINM1Q9NU53 330 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 BTBD7Q9P203 1132 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 PRUNE2Q8WUY3 3088 aa12.42□□□□□ -0.42
NPLOC4-220ENST00000576940 SLC15A5A6NIM6 579 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 DNM1LO00429 736 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 HLA-DOAP06340 250 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 GNAI3P08754 354 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 PLCG2P16885 1265 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 CCNA1P78396 465 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 RAB3GAP1Q15042 981 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 SLC39A5Q6ZMH5 540 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 ACER1Q8TDN7 264 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 BADQ92934 168 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 FEZ1Q99689 392 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
NPLOC4-220ENST00000576940 MSCO60682 206 aa12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 HOXC6P09630 235 aa12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 GRB14Q14449 540 aa12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 TATDN1Q6P1N9 297 aa12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 MAFAQ8NHW3 353 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 MYLIPQ8WY64 445 aa12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 C12orf42Q96LP6 360 aa12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 TTYH1Q9H313 450 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 TNNQ9UQP3 1299 aa12.4□□□□□ -0.42
NPLOC4-220ENST00000576940 IGHA2P01877 340 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 VCAM1P19320 739 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 CYP7A1P22680 504 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 ZAP70P43403 619 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 PRAMEF19Q5SWL8 479 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 DPP9Q86TI2 863 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 MIGA1Q8NAN2 632 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 ARRDC4Q8NCT1 418 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 IVNS1ABPQ9Y6Y0 642 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 FRMPD3Q5JV73 1810 aa12.39□□□□□ -0.43
NPLOC4-220ENST00000576940 TRIM43BA6NCK2 446 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 GNAI2P04899 355 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 CYBAP13498 195 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 USP5P45974 858 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 RARSP54136 660 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 USP14P54578 494 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 TRIM60Q495X7 471 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 FERMT2Q96AC1 680 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 TRIM43Q96BQ3 446 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 PRDM6Q9NQX0 595 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 CDK5RAP2Q96SN8 1893 aa12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-220ENST00000576940 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 COBLO75128 1261 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 CT47B1P0C2W7 299 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 ITGB8P26012 769 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 ADCYAP1R1P41586 468 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 PLCD1P51178 756 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 ABCB5Q2M3G0 1257 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 LBX2Q6XYB7 198 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 ARHGAP45Q92619 1136 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 MOV10L1Q9BXT6 1211 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 KIAA1683Q9H0B3 1180 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 SERPINB13Q9UIV8 391 aa12.37□□□□□ -0.43
NPLOC4-220ENST00000576940 MAST2Q6P0Q8 1798 aa12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 ADORA2AP29274 412 aa12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 CCDC8Q9H0W5 538 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 PDLIM7Q9NR12 457 aa12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
NPLOC4-220ENST00000576940 RLFQ13129 1914 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 LTBP2Q14767 1821 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 A0A1W2PRG0 241 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 SEPT4O43236 478 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 STRNO43815 780 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 IDH1O75874 414 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 FOSL2P15408 326 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 ERCC3P19447 782 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 SHMT1P34896 483 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 EPHB4P54760 987 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms