RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CDK12Q9NYV4 1490 aaPredicted RBP20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 GNAQP50148 359 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 MORC3Q14149 939 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 CCDC121Q6ZUS5 278 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 SRGAP1Q7Z6B7 1085 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 FMR1NBQ8N0W7 255 aaPredicted RBP20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 MADDQ8WXG6 1647 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 INPP5BP32019 993 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 IRX3P78415 501 aaPredicted RBP20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 SPATA1Q5VX52 437 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 TOGARAM2Q6ZUX3 1019 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 FAM204AQ9H8W3 233 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 ZSWIM5Q9P217 1185 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 NLRP1Q9C000 1473 aa20.02■□□□□ 0.8
ATPAF1-214ENST00000576409 BUB1O43683 1085 aa20.02■□□□□ 0.79
ATPAF1-214ENST00000576409 LDHCP07864 332 aa20.02■□□□□ 0.79
ATPAF1-214ENST00000576409 GBP2P32456 591 aaPredicted RBP20.02■□□□□ 0.79
ATPAF1-214ENST00000576409 NCAPH2Q6IBW4 605 aa20.02■□□□□ 0.79
ATPAF1-214ENST00000576409 IQGAP3Q86VI3 1631 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 ARMCX5Q6P1M9 558 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 VSTM4Q8IW00 320 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 PDE8AO60658 829 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 CXCR5P32302 372 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 BCAS4Q8TDM0 211 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 IFIH1Q9BYX4 1025 aaKnown RBP20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 KIF1BO60333 1816 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 ATP7BP35670 1465 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 CYP27A1Q02318 531 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 GPCPD1Q9NPB8 672 aa20.01■□□□□ 0.79
ATPAF1-214ENST00000576409 HSPA2P54652 639 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 PPARAQ07869 468 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 IQCB1Q15051 598 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 IKBKBO14920 756 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 GOLGA8HP0CJ92 632 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 PLCD1P51178 756 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 INF2Q27J81 1249 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 SAMM50Q9Y512 469 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 CYP2D7A0A087X1C5 515 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 TBCAO75347 108 aaKnown RBP20■□□□□ 0.79
ATPAF1-214ENST00000576409 TUBB4BP68371 445 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 SARM1Q6SZW1 724 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 SV2BQ7L1I2 683 aa20■□□□□ 0.79
ATPAF1-214ENST00000576409 CCT5P48643 541 aa19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 TFAP4Q01664 338 aa19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 MTF1Q14872 753 aa19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 DHX40Q8IX18 779 aaKnown RBP19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 RPGRQ92834 1020 aaKnown RBP19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 SELENOOQ9BVL4 669 aa19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 CEP104O60308 925 aa19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 GJC1P36383 396 aa19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 E4F1Q66K89 784 aaPredicted RBP19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 PPANQ9NQ55 473 aaKnown RBP19.99■□□□□ 0.79
ATPAF1-214ENST00000576409 GNGT1P63211 74 aa19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 FERMT2Q96AC1 680 aa19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 ABCB6Q9NP58 842 aa19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 ARID4AP29374 1257 aaPredicted RBP19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 ADAM21Q9UKJ8 722 aa19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 KSR1Q8IVT5 923 aa19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 RRP36Q96EU6 259 aaKnown RBP19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 WDR24Q96S15 920 aa19.98■□□□□ 0.79
ATPAF1-214ENST00000576409 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 SETDB2Q96T68 719 aa19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 SLC39A2Q9NP94 309 aa19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 RBM28Q9NW13 759 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 RRP15Q9Y3B9 282 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 NF2P35240 595 aa19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 COPB1P53618 953 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 PCDH11XQ9BZA7 1347 aa19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 PCDH11YQ9BZA8 1340 aa19.97■□□□□ 0.79
ATPAF1-214ENST00000576409 GCOM1H8Y6P7 765 aaPredicted RBP19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 MYZAPP0CAP1 466 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 GNA11P29992 359 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 TRIM14Q14142 442 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 TEX33O43247 280 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 E2F4Q16254 413 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 B4DLN1 442 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 HERC4Q5GLZ8 1057 aaPredicted RBP19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 BTG4Q9NY30 223 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 AXIN2Q9Y2T1 843 aa19.96■□□□□ 0.79
ATPAF1-214ENST00000576409 KIF28PB7ZC32 967 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 CCZ1BP86790 482 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 CCZ1P86791 482 aaPredicted RBP19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 LRWD1Q9UFC0 647 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 ZFYVE16Q7Z3T8 1539 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 SRGAP2O75044 1071 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 PDE8BO95263 885 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 TECP42680 631 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 ADAT2Q7Z6V5 191 aaKnown RBP19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 PPM1EQ8WY54 764 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 PHLPP2Q6ZVD8 1323 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 LDHBP07195 334 aaKnown RBP19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 CTSWP56202 376 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 WHAMMP3Q1A5X7 153 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 CABP7Q86V35 215 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 PPP6R2O75170 966 aa19.95■□□□□ 0.78
ATPAF1-214ENST00000576409 TNNC1P63316 161 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms