RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 GTF2A2P52657 109 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 SPP2Q13103 211 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.24
RPAIN-217ENST00000575711 NCOA7Q8NI08 942 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 USP26Q9BXU7 913 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 KCNH4Q9UQ05 1017 aa16.52■□□□□ 0.24
RPAIN-217ENST00000575711 MYH8P13535 1937 aa16.52■□□□□ 0.23
RPAIN-217ENST00000575711 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
RPAIN-217ENST00000575711 AOC2O75106 756 aa16.51■□□□□ 0.23
RPAIN-217ENST00000575711 MAP2K2P36507 400 aa16.51■□□□□ 0.23
RPAIN-217ENST00000575711 KIF23Q02241 960 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-217ENST00000575711 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
RPAIN-217ENST00000575711 FEZ1Q99689 392 aa16.51■□□□□ 0.23
RPAIN-217ENST00000575711 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.51■□□□□ 0.23
RPAIN-217ENST00000575711 ARHGEF10LQ9HCE6 1279 aa16.51■□□□□ 0.23
RPAIN-217ENST00000575711 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
RPAIN-217ENST00000575711 IGKV6D-41A0A0C4DH26 115 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 USP17L10C9JJH3 530 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 KDM4AO75164 1064 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 CETPP11597 493 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 SREBF2Q12772 1141 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 MTMR2Q13614 643 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 KRT32Q14532 448 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 STOX1Q6ZVD7 989 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 IQCA1Q86XH1 822 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
RPAIN-217ENST00000575711 DNAJC5GQ8N7S2 189 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 CEP95Q96GE4 821 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 SH2D4AQ9H788 454 aa16.5■□□□□ 0.23
RPAIN-217ENST00000575711 CCL15-CCL14A0A0B4J2E2 113 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 A0A0G2JLL6 359 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-217ENST00000575711 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 TTLL1O95922 423 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 EEF2P13639 858 aaKnown RBP16.49■□□□□ 0.23
RPAIN-217ENST00000575711 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-217ENST00000575711 USP14P54578 494 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 BACE1P56817 501 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 INHBEP58166 350 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 CCL15Q16663 113 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 TSGA10IPQ3SY00 556 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 PRRT2Q7Z6L0 340 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-217ENST00000575711 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 MS4A4AQ96JQ5 239 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 ZIC5Q96T25 663 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 TCP11L1Q9NUJ3 509 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 MTMR4Q9NYA4 1195 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 NYAP2Q9P242 653 aa16.49■□□□□ 0.23
RPAIN-217ENST00000575711 SEC24BO95487 1268 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 FASTKD5Q7L8L6 764 aaKnown RBP16.48■□□□□ 0.23
RPAIN-217ENST00000575711 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 KCNB2Q92953 911 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 UBAC1Q9BSL1 405 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 KIAA1683Q9H0B3 1180 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 IL17RBQ9NRM6 502 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 ZSWIM5Q9P217 1185 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 STX8Q9UNK0 236 aa16.48■□□□□ 0.23
RPAIN-217ENST00000575711 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-217ENST00000575711 NMT2O60551 498 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 HMGCS2P54868 508 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
RPAIN-217ENST00000575711 SH3D19Q5HYK7 790 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 GADL1Q6ZQY3 521 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 NKX2-3Q8TAU0 364 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 BRI3BPQ8WY22 251 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 NEK1Q96PY6 1258 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 SNX14Q9Y5W7 946 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
RPAIN-217ENST00000575711 GREB1LQ9C091 1923 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-217ENST00000575711 THSD7BQ9C0I4 1608 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 TM4SF4P48230 202 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
RPAIN-217ENST00000575711 OTUD7BQ6GQQ9 843 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 MB21D2Q8IYB1 491 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-217ENST00000575711 PROCA1Q8NCQ7 364 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-217ENST00000575711 MKL1Q969V6 931 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 TTC14Q96N46 770 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 ZSCAN10Q96SZ4 725 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-217ENST00000575711 GOPCQ9HD26 462 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 SYNPO2Q9UMS6 1093 aa16.46■□□□□ 0.23
RPAIN-217ENST00000575711 ERICH2A1L162 156 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 HMGB1P09429 215 aaKnown RBP16.45■□□□□ 0.22
RPAIN-217ENST00000575711 MCM5P33992 734 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 NOVP48745 357 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 DGKHQ86XP1 1220 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 C12orf42Q96LP6 360 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 VCPKMTQ9H867 229 aa16.45■□□□□ 0.22
RPAIN-217ENST00000575711 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms