RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 RHOXF2BP0C7M4 288 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 AMOTL1Q8IY63 956 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 KRI1Q8N9T8 703 aaKnown RBP9.68□□□□□ -0.86
RPAIN-215ENST00000575112 TC2NQ8N9U0 490 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 TGFBRAP1Q8WUH2 860 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 KIFC2Q96AC6 838 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 RHOXF2Q9BQY4 288 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 KCND1Q9NSA2 647 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 UTYO14607 1347 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 SOS2Q07890 1332 aaPredicted RBP9.68□□□□□ -0.86
RPAIN-215ENST00000575112 TRIM75PA6NK02 468 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 MYO1CO00159 1063 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 MB21D2Q8IYB1 491 aaPredicted RBP9.68□□□□□ -0.86
RPAIN-215ENST00000575112 FANCBQ8NB91 859 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 VPS18Q9P253 973 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 VSTM4Q8IW00 320 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
RPAIN-215ENST00000575112 AGXT2Q9BYV1 514 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 KRT23Q9C075 422 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 POLD4Q9HCU8 107 aa9.68□□□□□ -0.86
RPAIN-215ENST00000575112 ITPK1Q13572 414 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 LONRF2Q1L5Z9 754 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 UBA5Q9GZZ9 404 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 KAT14Q9H8E8 782 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 EPB41L4AQ9HCS5 686 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-215ENST00000575112 MRFAP1Q9Y605 127 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 SH2B2O14492 632 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-215ENST00000575112 N4BP3O15049 544 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 FAM193AP78312 1265 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 TFAP4Q01664 338 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 NUP88Q99567 741 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-215ENST00000575112 CSRNP2Q9H175 543 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 PHLPP2Q6ZVD8 1323 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 CCDC196A0A1B0GTZ2 297 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 CCDC194A0A1B0GVG4 234 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 EFCAB8A8MWE9 144 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 TSPY3P0CV98 308 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 TSPY8P0CW00 308 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 CASQ1P31415 396 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 TSR1Q2NL82 804 aaKnown RBP9.67□□□□□ -0.86
RPAIN-215ENST00000575112 RASGRP2Q7LDG7 609 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 BAG1Q99933 345 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-215ENST00000575112 TANGO6Q9C0B7 1094 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 NBPF3Q9H094 633 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 RNF41Q9H4P4 317 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-215ENST00000575112 ANKZF1Q9H8Y5 726 aa9.67□□□□□ -0.86
RPAIN-215ENST00000575112 MED1Q15648 1581 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-215ENST00000575112 LMTK3Q96Q04 1460 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 GSG1L2A8MUP6 293 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 HIBADHP31937 336 aaKnown RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 MYL5Q02045 173 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 KCTD19Q17RG1 926 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 RAD9BQ6WBX8 426 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 NOSTRINQ8IVI9 506 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 IPO4Q8TEX9 1081 aaKnown RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 RIN2Q8WYP3 895 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 NWD2Q9ULI1 1742 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 RNF225M0QZC1 329 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 TPM1P09493 284 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 RPS8P62241 208 aaKnown RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 LETM2Q2VYF4 491 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 CCDC178Q5BJE1 867 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 JAKMIP3Q5VZ66 844 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 RSRC2Q7L4I2 434 aaKnown RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 BRAPQ7Z569 592 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 ADGRA1Q86SQ6 560 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 POLR3EQ9NVU0 708 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 CCNL1Q9UK58 526 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 FAN1Q9Y2M0 1017 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 NCAPD2Q15021 1401 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 A0A1W2PQ27 194 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 A0A1W2PQ64 194 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 A0A1W2PQD8 194 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 ZMYND10O75800 440 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 CIAO1O76071 339 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 VEGFAP15692 232 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 MATR3P43243 847 aaKnown RBP eCLIP9.66□□□□□ -0.86
RPAIN-215ENST00000575112 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 CLEC10AQ8IUN9 316 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 WASF1Q92558 559 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 GPCPD1Q9NPB8 672 aa9.66□□□□□ -0.86
RPAIN-215ENST00000575112 SLURP2P0DP57 97 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 TCP10Q12799 353 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 KIF4BQ2VIQ3 1234 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 RPGRQ92834 1020 aaKnown RBP9.65□□□□□ -0.86
RPAIN-215ENST00000575112 PSMB7Q99436 277 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 ARFGAP3Q9NP61 516 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 TAB2Q9NYJ8 693 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 TRIM10Q9UDY6 481 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 MYH8P13535 1937 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 PP2D1A8MPX8 630 aa9.65□□□□□ -0.86
RPAIN-215ENST00000575112 KIF2AO00139 706 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms