RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 APOA5Q6Q788 366 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 TMEM179Q6ZVK1 233 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 RAB11FIP4Q86YS3 637 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 ZNF784Q8NCA9 323 aaPredicted RBP13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 ANKS1AQ92625 1134 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 CEP95Q96GE4 821 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
ATP2A3-213ENST00000574202 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 IGKV6D-41A0A0C4DH26 115 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 GOLGA8AA7E2F4 631 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 ADM5C9JUS6 153 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 DHX16O60231 1041 aaKnown RBP13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 CALM1P0DP23 149 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 CALM2P0DP24 149 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 CALM3P0DP25 149 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 MAP3K10Q02779 954 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 SCRN1Q12765 414 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 PRAMEF18Q5VWM3 479 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 KRT26Q7Z3Y9 468 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 MTMR4Q9NYA4 1195 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 PAPPA2Q9BXP8 1791 aa13.66□□□□□ -0.22
ATP2A3-213ENST00000574202 POLR2AP24928 1970 aaKnown RBP13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 DDAH1O94760 285 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 TTLL1O95922 423 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 GH2P01242 217 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 RXRAP19793 462 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 RCAN1P53805 252 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 ST3GAL1Q11201 340 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 RRP1BQ14684 758 aaKnown RBP13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 USP48Q86UV5 1035 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 TMEM47Q9BQJ4 181 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 GPBP1L1Q9HC44 474 aaPredicted RBP13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 HPS5Q9UPZ3 1129 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 SMC3Q9UQE7 1217 aa13.65□□□□□ -0.22
ATP2A3-213ENST00000574202 GREB1LQ9C091 1923 aaPredicted RBP13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 CPLX1O14810 134 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 CAP2P40123 477 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 ATP2B2Q01814 1243 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 SEPT2Q15019 361 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 RTN1Q16799 776 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 LDHDQ86WU2 507 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 PNMA1Q8ND90 353 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 CLIP2Q9UDT6 1046 aa13.64□□□□□ -0.23
ATP2A3-213ENST00000574202 CCDC196A0A1B0GTZ2 297 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 NF2P35240 595 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 NOVP48745 357 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 ICA1Q05084 483 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 SHROOM1Q2M3G4 852 aaPredicted RBP13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 CPLX2Q6PUV4 134 aaKnown RBP13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 CLEC10AQ8IUN9 316 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 FANCBQ8NB91 859 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 LLPHQ9BRT6 129 aaKnown RBP13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 CWC22Q9HCG8 908 aaKnown RBP13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 NYAP2Q9P242 653 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 ZBTB21Q9ULJ3 1066 aa13.63□□□□□ -0.23
ATP2A3-213ENST00000574202 NID2Q14112 1375 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 CTNND1O60716 968 aaKnown RBP13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 CDKL5O76039 1030 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 ASNSP08243 561 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 EEF2P13639 858 aaKnown RBP13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 KIF5BP33176 963 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 JAG1P78504 1218 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 TROAPQ12815 778 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 LRRC47Q8N1G4 583 aaKnown RBP13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 CDCA5Q96FF9 252 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 GLIS2Q9BZE0 524 aaPredicted RBP13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 GINM1Q9NU53 330 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 RBM28Q9NW13 759 aaKnown RBP13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 MTMR7Q9Y216 660 aa13.62□□□□□ -0.23
ATP2A3-213ENST00000574202 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 PPP1R12BO60237 982 aaPredicted RBP13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 GJB2P29033 226 aa13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 CDC27P30260 824 aa13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 ADD1P35611 737 aaKnown RBP13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 PRKG1Q13976 671 aa13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 GRM4Q14833 912 aa13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 MAP1SQ66K74 1059 aaPredicted RBP13.61□□□□□ -0.23
ATP2A3-213ENST00000574202 WRNIP1Q96S55 665 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms