RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 ZFYVE28Q9HCC9 887 aa15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
TRAPPC1-206ENST00000573989 BTBD19C9JJ37 291 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 SMIM22K7EJ46 135 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 FOXN1O15353 648 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 PRDM1O75626 825 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 HMGCS2P54868 508 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 JAG1P78504 1218 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 ICA1Q05084 483 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 MTMR2Q13614 643 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 TAF1CQ15572 869 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 SH3D19Q5HYK7 790 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 USP17L2Q6R6M4 530 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 PTPN18Q99952 460 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 ESYT1Q9BSJ8 1104 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 CFHR5Q9BXR6 569 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 SLC45A1Q9Y2W3 748 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 LOC285556D6RIA3 1793 aa15.13■□□□□ 0.01
TRAPPC1-206ENST00000573989 GREB1LQ9C091 1923 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 MYH4Q9Y623 1939 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 TSPY2A6NKD2 308 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 PDHXO00330 501 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 ORC4O43929 436 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 GUCY1A2P33402 732 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 HAND2P61296 217 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 SHROOM1Q2M3G4 852 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 AKNAD1Q5T1N1 836 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 FAM43AQ8N2R8 423 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 STAG1Q8WVM7 1258 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 PARK7Q99497 189 aaKnown RBP15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 PNMA3Q9UL41 463 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 AGTPBP1Q9UPW5 1226 aa15.12■□□□□ 0.01
TRAPPC1-206ENST00000573989 RANBP6O60518 1105 aaKnown RBP15.11■□□□□ 0.01
TRAPPC1-206ENST00000573989 FGRP09769 529 aa15.11■□□□□ 0.01
TRAPPC1-206ENST00000573989 TFAP4Q01664 338 aa15.11■□□□□ 0.01
TRAPPC1-206ENST00000573989 ATP2B2Q01814 1243 aa15.11■□□□□ 0.01
TRAPPC1-206ENST00000573989 IL25Q9H293 177 aa15.11■□□□□ 0.01
TRAPPC1-206ENST00000573989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRAPPC1-206ENST00000573989 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 OSBPP22059 807 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 MOGSQ13724 837 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 NOM1Q5C9Z4 860 aaKnown RBP15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 RRP12Q5JTH9 1297 aaKnown RBP15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 NEDD1Q8NHV4 660 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 ESR2Q92731 530 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 C12orf42Q96LP6 360 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 CNNM2Q9H8M5 875 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 GOPCQ9HD26 462 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 ANO2Q9NQ90 1003 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 PLIN4Q96Q06 1357 aa15.1■□□□□ 0.01
TRAPPC1-206ENST00000573989 TTLL1O95922 423 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 HSPA8P11142 646 aaKnown RBP15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 EEF2P13639 858 aaKnown RBP15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 LBX1P52954 281 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 PTH1RQ03431 593 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 TRDNQ13061 729 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 CRHR2Q13324 411 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 ZYXQ15942 572 aaKnown RBP15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 FAM47AQ5JRC9 791 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 GPAT2Q6NUI2 795 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 ACER1Q8TDN7 264 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 LPAR1Q92633 364 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 KRT23Q9C075 422 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 NYAP2Q9P242 653 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 TMX2Q9Y320 296 aa15.09■□□□□ 0.01
TRAPPC1-206ENST00000573989 TLR2O60603 784 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
TRAPPC1-206ENST00000573989 HOXA7P31268 230 aaPredicted RBP15.08■□□□□ 0
TRAPPC1-206ENST00000573989 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
TRAPPC1-206ENST00000573989 CCDC178Q5BJE1 867 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 TREML2Q5T2D2 321 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 RNF20Q5VTR2 975 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 SMCR8Q8TEV9 937 aaPredicted RBP15.08■□□□□ 0
TRAPPC1-206ENST00000573989 CEP95Q96GE4 821 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 PRDM10Q9NQV6 1147 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 EMILIN3Q9NT22 766 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 MTMR4Q9NYA4 1195 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 SYNPO2Q9UMS6 1093 aa15.08■□□□□ 0
TRAPPC1-206ENST00000573989 RBM8AQ9Y5S9 174 aaKnown RBP15.08■□□□□ 0
TRAPPC1-206ENST00000573989 CASP8AP2Q9UKL3 1982 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 IGKV6D-41A0A0C4DH26 115 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L15C9J2P7 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L13C9JLJ4 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L11C9JVI0 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L18D6R9N7 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L22D6RA61 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L17D6RBQ6 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L19D6RCP7 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L20D6RJB6 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 GPR25O00155 361 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 RAD21O60216 631 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 REC8O95072 547 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 USP17L24Q0WX57 530 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 IQCA1Q86XH1 822 aa15.07■□□□□ 0
TRAPPC1-206ENST00000573989 TBC1D10CQ8IV04 446 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms