RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 PPP4R2Q9NY27 417 aa25.2■■□□□ 1.62
ABR-221ENST00000573559 C19orf81C9J6K1 198 aa25.19■■□□□ 1.62
ABR-221ENST00000573559 PRDM1O75626 825 aa25.19■■□□□ 1.62
ABR-221ENST00000573559 ZNF287Q9HBT7 754 aa25.19■■□□□ 1.62
ABR-221ENST00000573559 CYP2C8P10632 490 aa25.18■■□□□ 1.62
ABR-221ENST00000573559 CTDSPL2Q05D32 466 aa25.18■■□□□ 1.62
ABR-221ENST00000573559 ALX1Q15699 326 aa25.18■■□□□ 1.62
ABR-221ENST00000573559 NOM1Q5C9Z4 860 aaKnown RBP25.18■■□□□ 1.62
ABR-221ENST00000573559 CLEC10AQ8IUN9 316 aa25.18■■□□□ 1.62
ABR-221ENST00000573559 ACER1Q8TDN7 264 aa25.18■■□□□ 1.62
ABR-221ENST00000573559 TLR2O60603 784 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 FGAP02671 866 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 RASA1P20936 1047 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 CHMLP26374 656 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 ICA1Q05084 483 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 PDE4BQ07343 736 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 USP17L2Q6R6M4 530 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 SLC45A1Q9Y2W3 748 aa25.17■■□□□ 1.62
ABR-221ENST00000573559 PABPC4Q13310 644 aaKnown RBP eCLIP25.16■■□□□ 1.62
ABR-221ENST00000573559 ZNF444Q8N0Y2 327 aaPredicted RBP25.16■■□□□ 1.62
ABR-221ENST00000573559 RUFY2Q8WXA3 655 aa25.16■■□□□ 1.62
ABR-221ENST00000573559 ARHGEF10LQ9HCE6 1279 aa25.16■■□□□ 1.62
ABR-221ENST00000573559 PNMA3Q9UL41 463 aa25.16■■□□□ 1.62
ABR-221ENST00000573559 GREB1LQ9C091 1923 aaPredicted RBP25.16■■□□□ 1.62
ABR-221ENST00000573559 ZMYM6O95789 1325 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 RAD50Q92878 1312 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 USP14P54578 494 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 ATP2B2Q01814 1243 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 SMCR8Q8TEV9 937 aaPredicted RBP25.15■■□□□ 1.62
ABR-221ENST00000573559 KIAA1683Q9H0B3 1180 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 IL25Q9H293 177 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 EMILIN3Q9NT22 766 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 CPA4Q9UI42 421 aa25.15■■□□□ 1.62
ABR-221ENST00000573559 HAND2P61296 217 aa25.14■■□□□ 1.62
ABR-221ENST00000573559 SP3Q02447 781 aa25.14■■□□□ 1.62
ABR-221ENST00000573559 TNS4Q8IZW8 715 aa25.14■■□□□ 1.62
ABR-221ENST00000573559 LAMA4Q16363 1823 aa25.14■■□□□ 1.61
ABR-221ENST00000573559 OSBPP22059 807 aa25.13■■□□□ 1.61
ABR-221ENST00000573559 IRX3P78415 501 aaPredicted RBP25.13■■□□□ 1.61
ABR-221ENST00000573559 CD99L2Q8TCZ2 262 aa25.13■■□□□ 1.61
ABR-221ENST00000573559 TOMM22Q9NS69 142 aa25.13■■□□□ 1.61
ABR-221ENST00000573559 ANAPC4Q9UJX5 808 aa25.13■■□□□ 1.61
ABR-221ENST00000573559 ADGRA2Q96PE1 1338 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 A0A1W2PRG0 241 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 BMP2KLQ5H9B9 411 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 ERO1AQ96HE7 468 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 C12orf42Q96LP6 360 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 DSCC1Q9BVC3 393 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 SH2D4AQ9H788 454 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 KANSL2Q9H9L4 492 aa25.12■■□□□ 1.61
ABR-221ENST00000573559 TSPY3P0CV98 308 aa25.11■■□□□ 1.61
ABR-221ENST00000573559 TSPY8P0CW00 308 aa25.11■■□□□ 1.61
ABR-221ENST00000573559 EEF2P13639 858 aaKnown RBP25.11■■□□□ 1.61
ABR-221ENST00000573559 FAM47AQ5JRC9 791 aa25.11■■□□□ 1.61
ABR-221ENST00000573559 C17orf99Q6UX52 265 aa25.11■■□□□ 1.61
ABR-221ENST00000573559 CTU1Q7Z7A3 348 aaKnown RBP25.11■■□□□ 1.61
ABR-221ENST00000573559 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.11■■□□□ 1.61
ABR-221ENST00000573559 ASCC2Q9H1I8 757 aaPredicted RBP25.11■■□□□ 1.61
ABR-221ENST00000573559 INCENPQ9NQS7 918 aa25.11■■□□□ 1.61
ABR-221ENST00000573559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.11■■□□□ 1.61
ABR-221ENST00000573559 ECM2O94769 699 aaPredicted RBP25.1■■□□□ 1.61
ABR-221ENST00000573559 VCAM1P19320 739 aa25.1■■□□□ 1.61
ABR-221ENST00000573559 IFFO2Q5TF58 517 aa25.1■■□□□ 1.61
ABR-221ENST00000573559 MYH4Q9Y623 1939 aa25.1■■□□□ 1.61
ABR-221ENST00000573559 ZSWIM8A7E2V4 1837 aa25.09■■□□□ 1.61
ABR-221ENST00000573559 TSPY2A6NKD2 308 aa25.09■■□□□ 1.61
ABR-221ENST00000573559 TFAP4Q01664 338 aa25.09■■□□□ 1.61
ABR-221ENST00000573559 RRP12Q5JTH9 1297 aaKnown RBP25.09■■□□□ 1.61
ABR-221ENST00000573559 TMX2Q9Y320 296 aa25.09■■□□□ 1.61
ABR-221ENST00000573559 TACC3Q9Y6A5 838 aa25.09■■□□□ 1.61
ABR-221ENST00000573559 PLIN4Q96Q06 1357 aa25.08■■□□□ 1.61
ABR-221ENST00000573559 ZNF213O14771 459 aa25.08■■□□□ 1.61
ABR-221ENST00000573559 SGSM2O43147 1006 aa25.08■■□□□ 1.61
ABR-221ENST00000573559 RAD21O60216 631 aa25.08■■□□□ 1.61
ABR-221ENST00000573559 RANBP6O60518 1105 aaKnown RBP25.08■■□□□ 1.61
ABR-221ENST00000573559 HOXA7P31268 230 aaPredicted RBP25.08■■□□□ 1.61
ABR-221ENST00000573559 SIAH1Q8IUQ4 282 aa25.08■■□□□ 1.61
ABR-221ENST00000573559 MCOLN1Q9GZU1 580 aa25.08■■□□□ 1.61
ABR-221ENST00000573559 RPAP3Q9H6T3 665 aaPredicted RBP25.08■■□□□ 1.61
ABR-221ENST00000573559 USP17L15C9J2P7 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L13C9JLJ4 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L11C9JVI0 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L18D6R9N7 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L22D6RA61 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L17D6RBQ6 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L19D6RCP7 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L20D6RJB6 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 USP17L24Q0WX57 530 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 KIF22Q14807 665 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 TBC1D10CQ8IV04 446 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 SPICE1Q8N0Z3 855 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 ANKRD13CQ8N6S4 541 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 NEDD1Q8NHV4 660 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 CEP95Q96GE4 821 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 VCPKMTQ9H867 229 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 CTNNA3Q9UI47 895 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 TRIM17Q9Y577 477 aa25.07■■□□□ 1.6
ABR-221ENST00000573559 IGKV6D-41A0A0C4DH26 115 aa25.06■■□□□ 1.6
ABR-221ENST00000573559 ORC4O43929 436 aa25.06■■□□□ 1.6
ABR-221ENST00000573559 BCRP11274 1271 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms