RNA–Protein interactions for RNA: ENST00000573377.1

ITGB3-203, Transcript of integrin subunit beta 3, humanhuman

TSL 1 (best)

Gene ITGB3, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-203ENST00000573377 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
ITGB3-203ENST00000573377 CATSPERGQ6ZRH7 1159 aa16.06■□□□□ 0.16
ITGB3-203ENST00000573377 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.06■□□□□ 0.16
ITGB3-203ENST00000573377 FEZ1Q99689 392 aa16.06■□□□□ 0.16
ITGB3-203ENST00000573377 C1orf115Q9H7X2 142 aa16.06■□□□□ 0.16
ITGB3-203ENST00000573377 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
ITGB3-203ENST00000573377 LAMA3Q16787 3333 aa16.06■□□□□ 0.16
ITGB3-203ENST00000573377 MS4A1P11836 297 aa16.05■□□□□ 0.16
ITGB3-203ENST00000573377 TRIM32Q13049 653 aa16.05■□□□□ 0.16
ITGB3-203ENST00000573377 ABCB5Q2M3G0 1257 aa16.05■□□□□ 0.16
ITGB3-203ENST00000573377 RIOK1Q9BRS2 568 aaKnown RBP16.05■□□□□ 0.16
ITGB3-203ENST00000573377 PORCNQ9H237 461 aa16.05■□□□□ 0.16
ITGB3-203ENST00000573377 STAP2Q9UGK3 403 aa16.05■□□□□ 0.16
ITGB3-203ENST00000573377 SLC15A5A6NIM6 579 aa16.04■□□□□ 0.16
ITGB3-203ENST00000573377 MSCO60682 206 aa16.04■□□□□ 0.16
ITGB3-203ENST00000573377 HOXC6P09630 235 aa16.04■□□□□ 0.16
ITGB3-203ENST00000573377 COL6A1P12109 1028 aa16.04■□□□□ 0.16
ITGB3-203ENST00000573377 RLBP1P12271 317 aa16.04■□□□□ 0.16
ITGB3-203ENST00000573377 CACNB2Q08289 660 aaPredicted RBP16.04■□□□□ 0.16
ITGB3-203ENST00000573377 MAP2K5Q13163 448 aa16.04■□□□□ 0.16
ITGB3-203ENST00000573377 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
ITGB3-203ENST00000573377 VCAM1P19320 739 aa16.03■□□□□ 0.16
ITGB3-203ENST00000573377 GABPAQ06546 454 aa16.03■□□□□ 0.16
ITGB3-203ENST00000573377 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
ITGB3-203ENST00000573377 LHX8Q68G74 356 aa16.03■□□□□ 0.16
ITGB3-203ENST00000573377 POTEEQ6S8J3 1075 aa16.03■□□□□ 0.16
ITGB3-203ENST00000573377 AACSQ86V21 672 aa16.03■□□□□ 0.16
ITGB3-203ENST00000573377 C7orf61Q8IZ16 206 aa16.03■□□□□ 0.16
ITGB3-203ENST00000573377 EDC3Q96F86 508 aaKnown RBP16.03■□□□□ 0.16
ITGB3-203ENST00000573377 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
ITGB3-203ENST00000573377 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
ITGB3-203ENST00000573377 PFASO15067 1338 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 MAGEB6P1A0A0J9YX57 407 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 CNMDO75829 334 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 PTPREP23469 700 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 SHMT1P34896 483 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 HNRNPUQ00839 825 aaKnown RBP eCLIP16.02■□□□□ 0.16
ITGB3-203ENST00000573377 RAB3GAP1Q15042 981 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.16
ITGB3-203ENST00000573377 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.16
ITGB3-203ENST00000573377 CRNKL1Q9BZJ0 848 aaKnown RBP16.02■□□□□ 0.16
ITGB3-203ENST00000573377 ANTXR1Q9H6X2 564 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 IVNS1ABPQ9Y6Y0 642 aa16.02■□□□□ 0.16
ITGB3-203ENST00000573377 NAV1Q8NEY1 1877 aa16.01■□□□□ 0.15
ITGB3-203ENST00000573377 STRNO43815 780 aa16.01■□□□□ 0.15
ITGB3-203ENST00000573377 POLR3DP05423 398 aaPredicted RBP16.01■□□□□ 0.15
ITGB3-203ENST00000573377 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
ITGB3-203ENST00000573377 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
ITGB3-203ENST00000573377 HOXC10Q9NYD6 342 aa16.01■□□□□ 0.15
ITGB3-203ENST00000573377 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
ITGB3-203ENST00000573377 ZNF236Q9UL36 1845 aa16.01■□□□□ 0.15
ITGB3-203ENST00000573377 SPDYE16A6NNV3 312 aaPredicted RBP16■□□□□ 0.15
ITGB3-203ENST00000573377 HMMRO75330 724 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 GUCY1A2P33402 732 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 PLCD1P51178 756 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 GRB14Q14449 540 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 SLC9C2Q5TAH2 1124 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 TDHQ8IZJ6 230 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 SHCBP1Q8NEM2 672 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 CHMP4BQ9H444 224 aaKnown RBP16■□□□□ 0.15
ITGB3-203ENST00000573377 SWAP70Q9UH65 585 aa16■□□□□ 0.15
ITGB3-203ENST00000573377 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 FRMPD3Q5JV73 1810 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 SOX1O00570 391 aaPredicted RBP15.99■□□□□ 0.15
ITGB3-203ENST00000573377 PEX10O60683 326 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 IGHA2P01877 340 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 PDE6AP16499 860 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 CCND3P30281 292 aaPredicted RBP15.99■□□□□ 0.15
ITGB3-203ENST00000573377 ZYXQ15942 572 aaKnown RBP15.99■□□□□ 0.15
ITGB3-203ENST00000573377 CCL14Q16627 93 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 ACER1Q8TDN7 264 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 LPAR1Q92633 364 aa15.99■□□□□ 0.15
ITGB3-203ENST00000573377 RPAP3Q9H6T3 665 aaPredicted RBP15.99■□□□□ 0.15
ITGB3-203ENST00000573377 ZMYND8Q9ULU4 1186 aaPredicted RBP15.99■□□□□ 0.15
ITGB3-203ENST00000573377 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
ITGB3-203ENST00000573377 MAGEA10P43363 369 aaPredicted RBP15.98■□□□□ 0.15
ITGB3-203ENST00000573377 COG2Q14746 738 aa15.98■□□□□ 0.15
ITGB3-203ENST00000573377 TMEM179Q6ZVK1 233 aa15.98■□□□□ 0.15
ITGB3-203ENST00000573377 DCP1AQ9NPI6 582 aaPredicted RBP15.98■□□□□ 0.15
ITGB3-203ENST00000573377 ATP8A2Q9NTI2 1148 aa15.98■□□□□ 0.15
ITGB3-203ENST00000573377 MCM9Q9NXL9 1143 aa15.98■□□□□ 0.15
ITGB3-203ENST00000573377 BTBD7Q9P203 1132 aa15.98■□□□□ 0.15
ITGB3-203ENST00000573377 DDX20Q9UHI6 824 aaKnown RBP15.98■□□□□ 0.15
ITGB3-203ENST00000573377 NDUFB9Q9Y6M9 179 aa15.98■□□□□ 0.15
ITGB3-203ENST00000573377 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 TCRBV5S4A2TA0A5A2 114 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
ITGB3-203ENST00000573377 ATP2B2Q01814 1243 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 SEPT2Q15019 361 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 OLFML2BQ68BL8 750 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 ABRAQ8N0Z2 381 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 LRCH3Q96II8 777 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 SH2D4AQ9H788 454 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 IL1RAPL2Q9NP60 686 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 SLC5A4Q9NY91 659 aa15.97■□□□□ 0.15
ITGB3-203ENST00000573377 DDX19BQ9UMR2 479 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms