RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 AGXT2Q9BYV1 514 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 LAMB2P55268 1798 aa16.09■□□□□ 0.17
TVP23A-207ENST00000573360 AKR1B1P15121 316 aa16.08■□□□□ 0.17
TVP23A-207ENST00000573360 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.17
TVP23A-207ENST00000573360 CCDC84Q86UT8 332 aaPredicted RBP16.08■□□□□ 0.17
TVP23A-207ENST00000573360 LLPHQ9BRT6 129 aaKnown RBP16.08■□□□□ 0.17
TVP23A-207ENST00000573360 LIFRP42702 1097 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 SPECC1Q5M775 1068 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 TMTC2Q8N394 836 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 SUPT20HQ8NEM7 779 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 UIMC1Q96RL1 719 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
TVP23A-207ENST00000573360 CCDC196A0A1B0GTZ2 297 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 DDTLA6NHG4 134 aaPredicted RBP16.08■□□□□ 0.16
TVP23A-207ENST00000573360 C15orf52Q6ZUT6 534 aaKnown RBP16.08■□□□□ 0.16
TVP23A-207ENST00000573360 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.16
TVP23A-207ENST00000573360 FAM217BQ9NTX9 383 aaPredicted RBP16.08■□□□□ 0.16
TVP23A-207ENST00000573360 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.08■□□□□ 0.16
TVP23A-207ENST00000573360 FAM205AQ6ZU69 1335 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 KIF28PB7ZC32 967 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 RASA1P20936 1047 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 TBC1D10BQ4KMP7 808 aaPredicted RBP16.07■□□□□ 0.16
TVP23A-207ENST00000573360 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 FBXO18Q8NFZ0 1043 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 PDCL3Q9H2J4 239 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 SALL1Q9NSC2 1324 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 HEATR3Q7Z4Q2 680 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 CDAN1Q8IWY9 1227 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 SPICE1Q8N0Z3 855 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 CSRNP1Q96S65 589 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
TVP23A-207ENST00000573360 PPP4CP60510 307 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 CXCL9Q07325 125 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
TVP23A-207ENST00000573360 SAMD7Q7Z3H4 446 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 ZNF287Q9HBT7 754 aa16.07■□□□□ 0.16
TVP23A-207ENST00000573360 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
TVP23A-207ENST00000573360 SLC16A2P36021 539 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 SGMS1Q86VZ5 419 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 CLIC4Q9Y696 253 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 A0A087WWV3 80 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 NBPF9Q3BBW0 867 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 SASS6Q6UVJ0 657 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 OXER1Q8TDS5 423 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
TVP23A-207ENST00000573360 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 HDAC9Q9UKV0 1011 aa16.06■□□□□ 0.16
TVP23A-207ENST00000573360 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 LIG1P18858 919 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 NLRP5P59047 1200 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 RESTQ13127 1097 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 SEC23AQ15436 765 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 FZD1Q9UP38 647 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 CCDC192P0DO97 292 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 FAM205CA6NFA0 338 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 SNAP25P60880 206 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 ZMYND15Q9H091 742 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 OSBPL5Q9H0X9 879 aaPredicted RBP16.05■□□□□ 0.16
TVP23A-207ENST00000573360 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
TVP23A-207ENST00000573360 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
TVP23A-207ENST00000573360 EGFRP00533 1210 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 NOLC1Q14978 699 aaKnown RBP eCLIP16.04■□□□□ 0.16
TVP23A-207ENST00000573360 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
TVP23A-207ENST00000573360 NUP62CLQ9H1M0 184 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 ANAPC4Q9UJX5 808 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 TMEM39BQ9GZU3 492 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 TNMDQ9H2S6 317 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
TVP23A-207ENST00000573360 ZNF831Q5JPB2 1677 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 TROAPQ12815 778 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 CFAP45Q9UL16 551 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 ZNRF3Q9ULT6 936 aa16.04■□□□□ 0.16
TVP23A-207ENST00000573360 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 CIAPIN1Q6FI81 312 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 MRVI1Q9Y6F6 885 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 A0A1B0GVL5 298 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 NTRK3Q16288 839 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 ISM2Q6H9L7 571 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 CCDC125Q86Z20 511 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 ZNF396Q96N95 335 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 FHDC1Q9C0D6 1143 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 RCSD1Q6JBY9 416 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 PDILTQ8N807 584 aa16.03■□□□□ 0.16
TVP23A-207ENST00000573360 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
TVP23A-207ENST00000573360 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms