RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 DDRGK1Q96HY6 314 aa25.04■■□□□ 1.6
CHRNB1-204ENST00000572857 RBPJLQ9UBG7 517 aa25.04■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L15C9J2P7 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L13C9JLJ4 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L12C9JPN9 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L11C9JVI0 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L21D6R901 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L18D6R9N7 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L22D6RA61 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L17D6RBQ6 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L19D6RCP7 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L20D6RJB6 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 USP17L24Q0WX57 530 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 CCAR1Q8IX12 1150 aaKnown RBP25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 AMOTL1Q8IY63 956 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 NKX2-3Q8TAU0 364 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 C12orf42Q96LP6 360 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 SWAP70Q9UH65 585 aa25.03■■□□□ 1.6
CHRNB1-204ENST00000572857 SMIM22K7EJ46 135 aa25.02■■□□□ 1.6
CHRNB1-204ENST00000572857 SHISA4Q96DD7 197 aa25.02■■□□□ 1.6
CHRNB1-204ENST00000572857 CRBNQ96SW2 442 aa25.02■■□□□ 1.6
CHRNB1-204ENST00000572857 GJD2Q9UKL4 321 aa25.02■■□□□ 1.6
CHRNB1-204ENST00000572857 RBBP6Q7Z6E9 1792 aaKnown RBP25.01■■□□□ 1.59
CHRNB1-204ENST00000572857 VCAM1P19320 739 aa25.01■■□□□ 1.59
CHRNB1-204ENST00000572857 GJA8P48165 433 aa25.01■■□□□ 1.59
CHRNB1-204ENST00000572857 Q3C1V9 767 aa25.01■■□□□ 1.59
CHRNB1-204ENST00000572857 C12orf60Q5U649 245 aa25.01■■□□□ 1.59
CHRNB1-204ENST00000572857 KBTBD3Q8NAB2 608 aa25.01■■□□□ 1.59
CHRNB1-204ENST00000572857 GTF3C2Q8WUA4 911 aaPredicted RBP25.01■■□□□ 1.59
CHRNB1-204ENST00000572857 MGAMO43451 1857 aa25■■□□□ 1.59
CHRNB1-204ENST00000572857 BRCA2P51587 3418 aa25■■□□□ 1.59
CHRNB1-204ENST00000572857 ERVK-9P63128 1117 aa25■■□□□ 1.59
CHRNB1-204ENST00000572857 ERVK-24P63145 666 aa25■■□□□ 1.59
CHRNB1-204ENST00000572857 POTEEQ6S8J3 1075 aa25■■□□□ 1.59
CHRNB1-204ENST00000572857 CATSPERGQ6ZRH7 1159 aa25■■□□□ 1.59
CHRNB1-204ENST00000572857 U2AF1L4Q8WU68 220 aaKnown RBP25■■□□□ 1.59
CHRNB1-204ENST00000572857 A0A1W2PRG0 241 aa24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 AKR1B1P15121 316 aa24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 MKI67P46013 3256 aaKnown RBP24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 CDK8P49336 464 aa24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 TMEM179Q6ZVK1 233 aa24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 OTUD7AQ8TE49 926 aaPredicted RBP24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 STRBPQ96SI9 672 aaKnown RBP24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 RPAP3Q9H6T3 665 aaPredicted RBP24.99■■□□□ 1.59
CHRNB1-204ENST00000572857 NAV1Q8NEY1 1877 aa24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 RNF113AO15541 343 aaKnown RBP24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 CYP2B6P20813 491 aa24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 MAPK4P31152 587 aa24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 CTR9Q6PD62 1173 aa24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 OSBP2Q969R2 916 aa24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 PORCNQ9H237 461 aa24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 DDX60LQ5H9U9 1706 aaKnown RBP24.98■■□□□ 1.59
CHRNB1-204ENST00000572857 CLEC10AQ8IUN9 316 aa24.97■■□□□ 1.59
CHRNB1-204ENST00000572857 DEFB118Q96PH6 123 aa24.97■■□□□ 1.59
CHRNB1-204ENST00000572857 NUDT12Q9BQG2 462 aa24.97■■□□□ 1.59
CHRNB1-204ENST00000572857 CWC22Q9HCG8 908 aaKnown RBP24.97■■□□□ 1.59
CHRNB1-204ENST00000572857 RABGAP1Q9Y3P9 1069 aa24.97■■□□□ 1.59
CHRNB1-204ENST00000572857 SGPL1O95470 568 aa24.96■■□□□ 1.59
CHRNB1-204ENST00000572857 TFRCP02786 760 aaKnown RBP24.96■■□□□ 1.59
CHRNB1-204ENST00000572857 HMGCRP04035 888 aa24.96■■□□□ 1.59
CHRNB1-204ENST00000572857 C16orf86Q6ZW13 317 aa24.96■■□□□ 1.59
CHRNB1-204ENST00000572857 APPBP2Q92624 585 aa24.96■■□□□ 1.59
CHRNB1-204ENST00000572857 CCDC17Q96LX7 622 aa24.96■■□□□ 1.59
CHRNB1-204ENST00000572857 ZBTB47Q9UFB7 747 aaPredicted RBP24.96■■□□□ 1.59
CHRNB1-204ENST00000572857 TTC41PQ6P2S7 1318 aa24.95■■□□□ 1.58
CHRNB1-204ENST00000572857 ERC2O15083 957 aa24.95■■□□□ 1.58
CHRNB1-204ENST00000572857 CNMDO75829 334 aa24.95■■□□□ 1.58
CHRNB1-204ENST00000572857 TRIM32Q13049 653 aa24.95■■□□□ 1.58
CHRNB1-204ENST00000572857 GPR142Q7Z601 462 aa24.95■■□□□ 1.58
CHRNB1-204ENST00000572857 STK11IPQ8N1F8 1099 aa24.95■■□□□ 1.58
CHRNB1-204ENST00000572857 ZFYP08048 801 aaPredicted RBP24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 CCNA1P78396 465 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 ICA1Q05084 483 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 ANKRD45Q5TZF3 282 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 WDR78Q5VTH9 848 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 PLEKHH3Q7Z736 793 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 SIAH1Q8IUQ4 282 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 SOCS4Q8WXH5 440 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 TANGO6Q9C0B7 1094 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 ARHGEF10LQ9HCE6 1279 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 DOCK3Q8IZD9 2030 aa24.94■■□□□ 1.58
CHRNB1-204ENST00000572857 GSG1L2A8MUP6 293 aa24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 GLRX3O76003 335 aaKnown RBP24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 ATP2B2Q01814 1243 aa24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 KIAA1755Q5JYT7 1200 aa24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 SPICE1Q8N0Z3 855 aa24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 PI4K2BQ8TCG2 481 aa24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 TRIB2Q92519 343 aa24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 PAK6Q9NQU5 681 aaPredicted RBP24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 BTBD7Q9P203 1132 aa24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 ARPP21Q9UBL0 812 aaPredicted RBP24.93■■□□□ 1.58
CHRNB1-204ENST00000572857 SPDYE16A6NNV3 312 aaPredicted RBP24.92■■□□□ 1.58
CHRNB1-204ENST00000572857 MINDY4BA8MYZ0 360 aa24.92■■□□□ 1.58
CHRNB1-204ENST00000572857 GPAA1O43292 621 aa24.92■■□□□ 1.58
CHRNB1-204ENST00000572857 FARP2O94887 1054 aaPredicted RBP24.92■■□□□ 1.58
CHRNB1-204ENST00000572857 APPP05067 770 aa24.92■■□□□ 1.58
CHRNB1-204ENST00000572857 MX1P20591 662 aa24.92■■□□□ 1.58
CHRNB1-204ENST00000572857 COG2Q14746 738 aa24.92■■□□□ 1.58
CHRNB1-204ENST00000572857 LRRFIP1Q32MZ4 808 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms