RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 CNBD1Q8NA66 436 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 GABPB2Q8TAK5 448 aaPredicted RBP10.24□□□□□ -0.77
TVP23A-205ENST00000572428 NELL1Q92832 810 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
TVP23A-205ENST00000572428 MROH5Q6ZUA9 1318 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 MX1P20591 662 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 CENPTQ96BT3 561 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 NLRP3Q96P20 1036 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 HOXC10Q9NYD6 342 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 GOLGA6L22H0YM25 854 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 GABPB1Q06547 395 aaPredicted RBP10.23□□□□□ -0.77
TVP23A-205ENST00000572428 DHX8Q14562 1220 aaKnown RBP10.23□□□□□ -0.77
TVP23A-205ENST00000572428 RABEP1Q15276 862 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 TOMM20Q15388 145 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 LRRC24Q50LG9 513 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 TNNI3KQ59H18 835 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 LMNTD2Q8IXW0 634 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 PI4K2BQ8TCG2 481 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 EAF2Q96CJ1 260 aaPredicted RBP10.23□□□□□ -0.77
TVP23A-205ENST00000572428 FAXDC2Q96IV6 333 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 ZNF594Q96JF6 807 aaPredicted RBP10.23□□□□□ -0.77
TVP23A-205ENST00000572428 FPGT-TNNI3KV9GXZ4 949 aa10.23□□□□□ -0.77
TVP23A-205ENST00000572428 C10orf71Q711Q0 1435 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 ST5P78524 1137 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 SFMBT2Q5VUG0 894 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 CCDC26Q8TAB7 109 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 USP26Q9BXU7 913 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 PDGFDQ9GZP0 370 aaPredicted RBP10.22□□□□□ -0.77
TVP23A-205ENST00000572428 ERC2O15083 957 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 VCAM1P19320 739 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 GTF2F1P35269 517 aaKnown RBP eCLIP10.22□□□□□ -0.77
TVP23A-205ENST00000572428 TFCP2Q12800 502 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 TRAF1Q13077 416 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 GLMNQ92990 594 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 BRIP1Q9BX63 1249 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 PUS3Q9BZE2 481 aaKnown RBP10.22□□□□□ -0.77
TVP23A-205ENST00000572428 CPSF2Q9P2I0 782 aaKnown RBP10.22□□□□□ -0.77
TVP23A-205ENST00000572428 ZNF646O15015 1829 aaPredicted RBP10.22□□□□□ -0.77
TVP23A-205ENST00000572428 BBOX1O75936 387 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 FGFR2P21802 821 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 KLHL10Q6JEL2 608 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 DRC7Q8IY82 874 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
TVP23A-205ENST00000572428 COMMD8Q9NX08 183 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 TFIP11Q9UBB9 837 aaKnown RBP10.22□□□□□ -0.77
TVP23A-205ENST00000572428 AKAP2Q9Y2D5 859 aa10.22□□□□□ -0.77
TVP23A-205ENST00000572428 ATP2B1P20020 1258 aa10.21□□□□□ -0.77
TVP23A-205ENST00000572428 AP1ARQ63HQ0 302 aa10.21□□□□□ -0.77
TVP23A-205ENST00000572428 SIL1Q9H173 461 aa10.21□□□□□ -0.77
TVP23A-205ENST00000572428 UNC45AQ9H3U1 944 aa10.21□□□□□ -0.77
TVP23A-205ENST00000572428 LMCD1Q9NZU5 365 aa10.21□□□□□ -0.77
TVP23A-205ENST00000572428 CHMP3Q9Y3E7 222 aa10.21□□□□□ -0.77
TVP23A-205ENST00000572428 MYO5AQ9Y4I1 1855 aaKnown RBP10.21□□□□□ -0.77
TVP23A-205ENST00000572428 FAM177BA6PVY3 158 aa10.21□□□□□ -0.78
TVP23A-205ENST00000572428 F8VZ95 297 aa10.21□□□□□ -0.78
TVP23A-205ENST00000572428 HHATQ5VTY9 493 aa10.21□□□□□ -0.78
TVP23A-205ENST00000572428 PCGF5Q86SE9 256 aa10.21□□□□□ -0.78
TVP23A-205ENST00000572428 ERP27Q96DN0 273 aa10.21□□□□□ -0.78
TVP23A-205ENST00000572428 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.78
TVP23A-205ENST00000572428 SEC31BQ9NQW1 1179 aa10.21□□□□□ -0.78
TVP23A-205ENST00000572428 K7ELQ4 463 aaPredicted RBP10.2□□□□□ -0.78
TVP23A-205ENST00000572428 IMPDH2P12268 514 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 PLEKHG6Q3KR16 790 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 NACC2Q96BF6 587 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 PLEKHG4BQ96PX9 1271 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 CRAMP1Q96RY5 1269 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 TMEM98Q9Y2Y6 226 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 MRPL42Q9Y6G3 142 aaKnown RBP10.2□□□□□ -0.78
TVP23A-205ENST00000572428 KRT38O76015 456 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 PDE8BO95263 885 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 IRX1P78414 480 aaPredicted RBP10.2□□□□□ -0.78
TVP23A-205ENST00000572428 LDHAL6AQ6ZMR3 332 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 JAZF1Q86VZ6 243 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 TANGO6Q9C0B7 1094 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
TVP23A-205ENST00000572428 MMP10P09238 476 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 GRAPQ13588 217 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 GJC2Q5T442 439 aaPredicted RBP10.2□□□□□ -0.78
TVP23A-205ENST00000572428 FAAH2Q6GMR7 532 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 GRAPLQ8TC17 118 aaPredicted RBP10.2□□□□□ -0.78
TVP23A-205ENST00000572428 SLC39A13Q96H72 371 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 FAM81BQ96LP2 452 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 ECHDC1Q9NTX5 307 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 DBNLQ9UJU6 430 aaKnown RBP10.2□□□□□ -0.78
TVP23A-205ENST00000572428 PARP3Q9Y6F1 533 aa10.2□□□□□ -0.78
TVP23A-205ENST00000572428 SLX4Q8IY92 1834 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 CDKL5O76039 1030 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 CSPG5O95196 566 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 RBP3P10745 1247 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 DDIT3P35638 169 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 IGHMBP2P38935 993 aaKnown RBP10.19□□□□□ -0.78
TVP23A-205ENST00000572428 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 E2F4Q16254 413 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 COBLL1Q53SF7 1204 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 LLGL2Q6P1M3 1020 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 AACSQ86V21 672 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 ANKRD18AQ8IVF6 992 aa10.19□□□□□ -0.78
TVP23A-205ENST00000572428 TRIM42Q8IWZ5 723 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms