RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 RSBN1LQ6PCB5 846 aaPredicted RBP13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 RASGRP2Q7LDG7 609 aa13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 WASF1Q92558 559 aa13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 FAM198AQ9UFP1 575 aa13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 SERPINB13Q9UIV8 391 aa13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
TOM1L1-213ENST00000572405 MYH8P13535 1937 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 CNTNAP5Q8WYK1 1306 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 PTGER2P43116 358 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 NIM1KQ8IY84 436 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 SRBD1Q8N5C6 995 aaKnown RBP13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 NEDD1Q8NHV4 660 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 TDRD3Q9H7E2 651 aaKnown RBP13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 KCNJ14Q9UNX9 436 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 FER1L6Q2WGJ9 1857 aa13.94□□□□□ -0.18
TOM1L1-213ENST00000572405 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 MYSM1Q5VVJ2 828 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 BRAPQ7Z569 592 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 ZNF396Q96N95 335 aaPredicted RBP13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 TAOK3Q9H2K8 898 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 SIPA1L1O43166 1804 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 SYCE3A1L190 88 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 NFKBIEO00221 500 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 HLA-DOAP06340 250 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 VIL1P09327 827 aaKnown RBP13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 AKR1B1P15121 316 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 GNL2Q13823 731 aaKnown RBP13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 PKN1Q16512 942 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 CLEC10AQ8IUN9 316 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 SHISA4Q96DD7 197 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 PRMT6Q96LA8 375 aaPredicted RBP13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 ZNRF3Q9ULT6 936 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 MYO3BQ8WXR4 1341 aa13.93□□□□□ -0.18
TOM1L1-213ENST00000572405 DDTLA6NHG4 134 aaPredicted RBP13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 SHMT1P34896 483 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 ZNF445P59923 1031 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 PIBF1Q8WXW3 757 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 GMLQ99445 158 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 IDI2Q9BXS1 227 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 DNAJC18Q9H819 358 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 MMP1P03956 469 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 KIF5BP33176 963 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 SH3BP5LQ7L8J4 393 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 VPS54Q9P1Q0 977 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 CLIC4Q9Y696 253 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 PLIN4Q96Q06 1357 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 SRCAPQ6ZRS2 3230 aa13.92□□□□□ -0.18
TOM1L1-213ENST00000572405 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 PRPF3O43395 683 aaKnown RBP13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 LIG1P18858 919 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 GRM4Q14833 912 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 ATL3Q6DD88 541 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 VPS33BQ9H267 617 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 SWAP70Q9UH65 585 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 RCOR1Q9UKL0 485 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 BTBD18B2RXH4 712 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 EIF6P56537 245 aaKnown RBP13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 CXCL9Q07325 125 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 DIS3L2Q8IYB7 885 aaKnown RBP13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 NLGN2Q8NFZ4 835 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 MAD2L2Q9UI95 211 aa13.91□□□□□ -0.18
TOM1L1-213ENST00000572405 CLRN2A0PK11 232 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 CCDC183Q5T5S1 534 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 BICD2Q8TD16 824 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 EHD4Q9H223 541 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 RTEL1Q9NZ71 1219 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 GOLGA8HP0CJ92 632 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 RASSF7Q02833 373 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 NR5A1Q13285 461 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 OXER1Q8TDS5 423 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 DHX36Q9H2U1 1008 aaKnown RBP13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 MTMR4Q9NYA4 1195 aa13.9□□□□□ -0.18
TOM1L1-213ENST00000572405 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
TOM1L1-213ENST00000572405 MPHOSPH10O00566 681 aaKnown RBP13.89□□□□□ -0.19
TOM1L1-213ENST00000572405 TOP1P11387 765 aaKnown RBP13.89□□□□□ -0.19
TOM1L1-213ENST00000572405 VEGFAP15692 232 aaPredicted RBP13.89□□□□□ -0.19
TOM1L1-213ENST00000572405 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
TOM1L1-213ENST00000572405 SHROOM1Q2M3G4 852 aaPredicted RBP13.89□□□□□ -0.19
TOM1L1-213ENST00000572405 NOSTRINQ8IVI9 506 aa13.89□□□□□ -0.19
TOM1L1-213ENST00000572405 LRRC47Q8N1G4 583 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms