RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 GNL2Q13823 731 aaKnown RBP22.52■■□□□ 1.2
RPAIN-210ENST00000571613 CCDC17Q96LX7 622 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 LZTS2Q9BRK4 669 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 TMOD2Q9NZR1 351 aa22.52■■□□□ 1.2
RPAIN-210ENST00000571613 PPP1R1BQ9UD71 204 aaPredicted RBP22.52■■□□□ 1.2
RPAIN-210ENST00000571613 PSMD14O00487 310 aa22.51■■□□□ 1.19
RPAIN-210ENST00000571613 NOVP48745 357 aa22.51■■□□□ 1.19
RPAIN-210ENST00000571613 L1TD1Q5T7N2 865 aaKnown RBP22.51■■□□□ 1.19
RPAIN-210ENST00000571613 GMLQ99445 158 aa22.51■■□□□ 1.19
RPAIN-210ENST00000571613 TFIP11Q9UBB9 837 aaKnown RBP22.51■■□□□ 1.19
RPAIN-210ENST00000571613 PI4KBQ9UBF8 816 aa22.51■■□□□ 1.19
RPAIN-210ENST00000571613 RCOR1Q9UKL0 485 aa22.51■■□□□ 1.19
RPAIN-210ENST00000571613 STX8Q9UNK0 236 aa22.51■■□□□ 1.19
RPAIN-210ENST00000571613 LTBP3Q9NS15 1303 aa22.5■■□□□ 1.19
RPAIN-210ENST00000571613 TOP1P11387 765 aaKnown RBP22.5■■□□□ 1.19
RPAIN-210ENST00000571613 ZNF445P59923 1031 aa22.5■■□□□ 1.19
RPAIN-210ENST00000571613 FUT2Q10981 343 aa22.5■■□□□ 1.19
RPAIN-210ENST00000571613 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
RPAIN-210ENST00000571613 ECM29Q5VYK3 1845 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 GOLGA6L3A6NEY3 463 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 RAD17O75943 681 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 LETM1O95202 739 aaPredicted RBP22.49■■□□□ 1.19
RPAIN-210ENST00000571613 GRM4Q14833 912 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 OTUD7BQ6GQQ9 843 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 TMEM47Q9BQJ4 181 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 COL2A1P02458 1487 aaPredicted RBP22.49■■□□□ 1.19
RPAIN-210ENST00000571613 U2AF2P26368 475 aaKnown RBP eCLIP22.49■■□□□ 1.192e-8■□□□□ 9.8
RPAIN-210ENST00000571613 NFIAQ12857 509 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 MYSM1Q5VVJ2 828 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 RTEL1Q9NZ71 1219 aa22.49■■□□□ 1.19
RPAIN-210ENST00000571613 MMP1P03956 469 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 PTGER2P43116 358 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 TNIP1Q15025 636 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 DLGAP5Q15398 846 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 ZSCAN23Q3MJ62 389 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 CCDC82Q8N4S0 544 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 MTMR14Q8NCE2 650 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 AIFM3Q96NN9 605 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 TRIM34Q9BYJ4 488 aa22.48■■□□□ 1.19
RPAIN-210ENST00000571613 FOXP1Q9H334 677 aaPredicted RBP22.48■■□□□ 1.19
RPAIN-210ENST00000571613 CIAPIN1Q6FI81 312 aa22.47■■□□□ 1.19
RPAIN-210ENST00000571613 POLR3EQ9NVU0 708 aa22.47■■□□□ 1.19
RPAIN-210ENST00000571613 TMEM63CQ9P1W3 806 aa22.47■■□□□ 1.19
RPAIN-210ENST00000571613 FAM198AQ9UFP1 575 aa22.47■■□□□ 1.19
RPAIN-210ENST00000571613 BRCA1P38398 1863 aaKnown RBP22.47■■□□□ 1.19
RPAIN-210ENST00000571613 FSD2A1L4K1 749 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 SPDYE2BA6NHP3 402 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 PLEKHA8P1O95397 391 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 YEATS4O95619 227 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 SPDYE6P0CI01 402 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 SMARCA1P28370 1054 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 CCDC183Q5T5S1 534 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 FAM177A1Q8N128 213 aaPredicted RBP22.46■■□□□ 1.19
RPAIN-210ENST00000571613 CEP95Q96GE4 821 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 USP28Q96RU2 1077 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 BCS1LQ9Y276 419 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 V9GY48 417 aaPredicted RBP22.46■■□□□ 1.19
RPAIN-210ENST00000571613 ATRNL1Q5VV63 1379 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 CNTNAP5Q8WYK1 1306 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 GUCY1A2P33402 732 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 FKBP1CQ5VVH2 108 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 ZSCAN29Q8IWY8 852 aaPredicted RBP22.46■■□□□ 1.19
RPAIN-210ENST00000571613 CMTR1Q8N1G2 835 aaKnown RBP22.46■■□□□ 1.19
RPAIN-210ENST00000571613 SRBD1Q8N5C6 995 aaKnown RBP22.46■■□□□ 1.19
RPAIN-210ENST00000571613 KCNG4Q8TDN1 519 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 PRMT6Q96LA8 375 aaPredicted RBP22.46■■□□□ 1.19
RPAIN-210ENST00000571613 TDRD3Q9H7E2 651 aaKnown RBP22.46■■□□□ 1.19
RPAIN-210ENST00000571613 BRMS1Q9HCU9 246 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 MTMR4Q9NYA4 1195 aa22.46■■□□□ 1.19
RPAIN-210ENST00000571613 FER1L6Q2WGJ9 1857 aa22.45■■□□□ 1.19
RPAIN-210ENST00000571613 IGKV6D-41A0A0C4DH26 115 aa22.45■■□□□ 1.18
RPAIN-210ENST00000571613 SHMT1P34896 483 aa22.45■■□□□ 1.18
RPAIN-210ENST00000571613 METTL16Q86W50 562 aaKnown RBP22.45■■□□□ 1.18
RPAIN-210ENST00000571613 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.45■■□□□ 1.18
RPAIN-210ENST00000571613 GJB4Q9NTQ9 266 aa22.45■■□□□ 1.18
RPAIN-210ENST00000571613 ADAMTSL1Q8N6G6 1762 aa22.45■■□□□ 1.18
RPAIN-210ENST00000571613 MYH15Q9Y2K3 1946 aa22.44■■□□□ 1.18
RPAIN-210ENST00000571613 TTLL1O95922 423 aa22.44■■□□□ 1.18
RPAIN-210ENST00000571613 RPS12P25398 132 aaKnown RBP22.44■■□□□ 1.18
RPAIN-210ENST00000571613 CXCL9Q07325 125 aa22.44■■□□□ 1.18
RPAIN-210ENST00000571613 TCP10Q12799 353 aa22.44■■□□□ 1.18
RPAIN-210ENST00000571613 PKN1Q16512 942 aa22.44■■□□□ 1.18
RPAIN-210ENST00000571613 PSDA5PKW4 1024 aaPredicted RBP22.43■■□□□ 1.18
RPAIN-210ENST00000571613 PALM3A6NDB9 673 aaPredicted RBP22.43■■□□□ 1.18
RPAIN-210ENST00000571613 NFKBIEO00221 500 aa22.43■■□□□ 1.18
RPAIN-210ENST00000571613 MYO1BO43795 1136 aa22.43■■□□□ 1.18
RPAIN-210ENST00000571613 NASPP49321 788 aaPredicted RBP22.43■■□□□ 1.18
RPAIN-210ENST00000571613 NOSTRINQ8IVI9 506 aa22.43■■□□□ 1.18
RPAIN-210ENST00000571613 DIS3L2Q8IYB7 885 aaKnown RBP22.43■■□□□ 1.18
RPAIN-210ENST00000571613 MAD2L2Q9UI95 211 aa22.43■■□□□ 1.18
RPAIN-210ENST00000571613 PCDHAC2Q9Y5I4 1007 aa22.43■■□□□ 1.18
RPAIN-210ENST00000571613 KIF28PB7ZC32 967 aa22.42■■□□□ 1.18
RPAIN-210ENST00000571613 PARP1P09874 1014 aaKnown RBP22.42■■□□□ 1.18
RPAIN-210ENST00000571613 SCG2P13521 617 aa22.42■■□□□ 1.18
RPAIN-210ENST00000571613 AKR1B1P15121 316 aa22.42■■□□□ 1.18
RPAIN-210ENST00000571613 STK38Q15208 465 aa22.42■■□□□ 1.18
RPAIN-210ENST00000571613 PFKFB3Q16875 520 aaPredicted RBP22.42■■□□□ 1.18
RPAIN-210ENST00000571613 SH3GLB2Q9NR46 395 aa22.42■■□□□ 1.18
RPAIN-210ENST00000571613 COL4A5P29400 1685 aa22.42■■□□□ 1.18
RPAIN-210ENST00000571613 MRE11P49959 708 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms