RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 SHISA4Q96DD7 197 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 UNC93B1Q9H1C4 597 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 SLC4A4Q9Y6R1 1079 aa16.58■□□□□ 0.24
RAB40B-204ENST00000571554 PLXNB2O15031 1838 aa16.57■□□□□ 0.24
RAB40B-204ENST00000571554 UBXN2AP68543 259 aa16.57■□□□□ 0.24
RAB40B-204ENST00000571554 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
RAB40B-204ENST00000571554 MORF4L1Q9UBU8 362 aa16.57■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L12C9JPN9 530 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L21D6R901 530 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 AKR1B1P15121 316 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 VCAM1P19320 739 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 IRF5Q13568 498 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 Q3C1V9 767 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 ATP8A2Q9NTI2 1148 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 RBPJLQ9UBG7 517 aa16.56■□□□□ 0.24
RAB40B-204ENST00000571554 A0A1W2PRG0 241 aa16.55■□□□□ 0.24
RAB40B-204ENST00000571554 USP14P54578 494 aa16.55■□□□□ 0.24
RAB40B-204ENST00000571554 KBTBD3Q8NAB2 608 aa16.55■□□□□ 0.24
RAB40B-204ENST00000571554 GPRC5AQ8NFJ5 357 aa16.55■□□□□ 0.24
RAB40B-204ENST00000571554 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
RAB40B-204ENST00000571554 KIAA1683Q9H0B3 1180 aa16.55■□□□□ 0.24
RAB40B-204ENST00000571554 PORCNQ9H237 461 aa16.55■□□□□ 0.24
RAB40B-204ENST00000571554 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 CYP2B6P20813 491 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 ERVK-9P63128 1117 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 ERVK-24P63145 666 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 TRIM32Q13049 653 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 C12orf60Q5U649 245 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 PXYLP1Q8TE99 480 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 OSBP2Q969R2 916 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 SWAP70Q9UH65 585 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 GJD2Q9UKL4 321 aa16.54■□□□□ 0.24
RAB40B-204ENST00000571554 CNMDO75829 334 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 GJB1P08034 283 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 GJA8P48165 433 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 CDK8P49336 464 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 KIAA1755Q5JYT7 1200 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 CATSPERGQ6ZRH7 1159 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
RAB40B-204ENST00000571554 AMOTL1Q8IY63 956 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 U2AF1L4Q8WU68 220 aaKnown RBP16.53■□□□□ 0.24
RAB40B-204ENST00000571554 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
RAB40B-204ENST00000571554 STRBPQ96SI9 672 aaKnown RBP16.53■□□□□ 0.24
RAB40B-204ENST00000571554 M0R2C6 588 aa16.52■□□□□ 0.24
RAB40B-204ENST00000571554 RNF113AO15541 343 aaKnown RBP16.52■□□□□ 0.24
RAB40B-204ENST00000571554 WDR78Q5VTH9 848 aa16.52■□□□□ 0.24
RAB40B-204ENST00000571554 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.24
RAB40B-204ENST00000571554 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
RAB40B-204ENST00000571554 APPBP2Q92624 585 aa16.52■□□□□ 0.24
RAB40B-204ENST00000571554 DEFB118Q96PH6 123 aa16.52■□□□□ 0.24
RAB40B-204ENST00000571554 ATP2B2Q01814 1243 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 ICA1Q05084 483 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
RAB40B-204ENST00000571554 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 GPR142Q7Z601 462 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 SPICE1Q8N0Z3 855 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 TRIB2Q92519 343 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 SEC62Q99442 399 aaKnown RBP16.51■□□□□ 0.23
RAB40B-204ENST00000571554 TANGO6Q9C0B7 1094 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
RAB40B-204ENST00000571554 BTBD7Q9P203 1132 aa16.51■□□□□ 0.23
RAB40B-204ENST00000571554 TTC41PQ6P2S7 1318 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
RAB40B-204ENST00000571554 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 GPAA1O43292 621 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 SGPL1O95470 568 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 HMGCRP04035 888 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 MX1P20591 662 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 MAPK4P31152 587 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 GTF3C2Q8WUA4 911 aaPredicted RBP16.5■□□□□ 0.23
RAB40B-204ENST00000571554 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 FSD1Q9BTV5 496 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
RAB40B-204ENST00000571554 RABGAP1Q9Y3P9 1069 aa16.5■□□□□ 0.23
RAB40B-204ENST00000571554 ERC2O15083 957 aa16.49■□□□□ 0.23
RAB40B-204ENST00000571554 FARP2O94887 1054 aaPredicted RBP16.49■□□□□ 0.23
RAB40B-204ENST00000571554 TFRCP02786 760 aaKnown RBP16.49■□□□□ 0.23
RAB40B-204ENST00000571554 APPP05067 770 aa16.49■□□□□ 0.23
RAB40B-204ENST00000571554 CCL14Q16627 93 aa16.49■□□□□ 0.23
RAB40B-204ENST00000571554 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
RAB40B-204ENST00000571554 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAB40B-204ENST00000571554 ARHGEF10LQ9HCE6 1279 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms