RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 MAPKAPK5Q8IW41 473 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 TGFBRAP1Q8WUH2 860 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 MYLIPQ8WY64 445 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 C12orf42Q96LP6 360 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 FEZ1Q99689 392 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 DNAJC18Q9H819 358 aa13.93□□□□□ -0.18
CHMP6-202ENST00000571457 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
CHMP6-202ENST00000571457 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHMP6-202ENST00000571457 FLT1P17948 1338 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 LTBP2Q14767 1821 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 CYP2C19P33261 490 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 GRB14Q14449 540 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 C9orf50Q5SZB4 431 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 POTEEQ6S8J3 1075 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 LBX2Q6XYB7 198 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 BADQ92934 168 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
CHMP6-202ENST00000571457 TTYH1Q9H313 450 aaPredicted RBP13.92□□□□□ -0.18
CHMP6-202ENST00000571457 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 NDUFB9Q9Y6M9 179 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 MUC3AQ02505 3323 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 SIPA1L1O43166 1804 aa13.92□□□□□ -0.18
CHMP6-202ENST00000571457 IGSF3O75054 1194 aa13.91□□□□□ -0.18
CHMP6-202ENST00000571457 CNMDO75829 334 aa13.91□□□□□ -0.18
CHMP6-202ENST00000571457 GH2P01242 217 aa13.91□□□□□ -0.18
CHMP6-202ENST00000571457 GNAI3P08754 354 aa13.91□□□□□ -0.18
CHMP6-202ENST00000571457 MCAMP43121 646 aa13.91□□□□□ -0.18
CHMP6-202ENST00000571457 GJC2Q5T442 439 aaPredicted RBP13.91□□□□□ -0.18
CHMP6-202ENST00000571457 CATSPERGQ6ZRH7 1159 aa13.91□□□□□ -0.18
CHMP6-202ENST00000571457 DPP9Q86TI2 863 aa13.91□□□□□ -0.18
CHMP6-202ENST00000571457 STRNO43815 780 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 CYBAP13498 195 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 MTX1Q13505 466 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 SNX17Q15036 470 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 ZYXQ15942 572 aaKnown RBP13.9□□□□□ -0.18
CHMP6-202ENST00000571457 SHROOM1Q2M3G4 852 aaPredicted RBP13.9□□□□□ -0.18
CHMP6-202ENST00000571457 TJAP1Q5JTD0 557 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 C1orf53Q5VUE5 145 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 OLFML2BQ68BL8 750 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 MEIS3Q99687 375 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 SLC5A4Q9NY91 659 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 RLFQ13129 1914 aa13.9□□□□□ -0.18
CHMP6-202ENST00000571457 SEPT4O43236 478 aa13.89□□□□□ -0.19
CHMP6-202ENST00000571457 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
CHMP6-202ENST00000571457 TRIM60Q495X7 471 aa13.89□□□□□ -0.19
CHMP6-202ENST00000571457 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
CHMP6-202ENST00000571457 TRPV1Q8NER1 839 aa13.89□□□□□ -0.19
CHMP6-202ENST00000571457 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
CHMP6-202ENST00000571457 PDLIM7Q9NR12 457 aa13.89□□□□□ -0.19
CHMP6-202ENST00000571457 SAP30BPQ9UHR5 308 aaKnown RBP13.89□□□□□ -0.19
CHMP6-202ENST00000571457 NOB1Q9ULX3 412 aaKnown RBP13.89□□□□□ -0.19
CHMP6-202ENST00000571457 TNFRSF10AO00220 468 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 IGHA2P01877 340 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 VCAM1P19320 739 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 COL9A1P20849 921 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 G3BP1Q13283 466 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHMP6-202ENST00000571457 RAB3GAP1Q15042 981 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 TATDN1Q6P1N9 297 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
CHMP6-202ENST00000571457 BTBD7Q9P203 1132 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 TACC3Q9Y6A5 838 aa13.88□□□□□ -0.19
CHMP6-202ENST00000571457 SPDYE16A6NNV3 312 aaPredicted RBP13.87□□□□□ -0.19
CHMP6-202ENST00000571457 CT47B1P0C2W7 299 aaPredicted RBP13.87□□□□□ -0.19
CHMP6-202ENST00000571457 ADORA2AP29274 412 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 ADCYAP1R1P41586 468 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 TLE2Q04725 743 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 CCDC158Q5M9N0 1113 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 TTC39AQ5SRH9 613 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 EHD4Q9H223 541 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 CABP5Q9NP86 173 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 SERPINB13Q9UIV8 391 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 FOCADQ5VW36 1801 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
CHMP6-202ENST00000571457 MYO9BQ13459 2157 aa13.86□□□□□ -0.19
CHMP6-202ENST00000571457 TRIM43BA6NCK2 446 aa13.86□□□□□ -0.19
CHMP6-202ENST00000571457 ABCB5Q2M3G0 1257 aa13.86□□□□□ -0.19
CHMP6-202ENST00000571457 CERKLQ49MI3 558 aaPredicted RBP13.86□□□□□ -0.19
CHMP6-202ENST00000571457 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
CHMP6-202ENST00000571457 TTC6Q86TZ1 520 aa13.86□□□□□ -0.19
CHMP6-202ENST00000571457 SHCBP1Q8NEM2 672 aa13.86□□□□□ -0.19
CHMP6-202ENST00000571457 TRIM43Q96BQ3 446 aaPredicted RBP13.86□□□□□ -0.19
CHMP6-202ENST00000571457 RPAP3Q9H6T3 665 aaPredicted RBP13.86□□□□□ -0.19
CHMP6-202ENST00000571457 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
CHMP6-202ENST00000571457 CLTBP09497 229 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 COG2Q14746 738 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 LRRC41Q15345 812 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 ANO1Q5XXA6 986 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 SH3RF1Q7Z6J0 888 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 ACER1Q8TDN7 264 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 FERMT2Q96AC1 680 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 MOV10L1Q9BXT6 1211 aaKnown RBP13.85□□□□□ -0.19
CHMP6-202ENST00000571457 GPR108Q9NPR9 543 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 ZNF236Q9UL36 1845 aa13.85□□□□□ -0.19
CHMP6-202ENST00000571457 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.84□□□□□ -0.19
CHMP6-202ENST00000571457 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms