RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
LITAF-206ENST00000571277 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
LITAF-206ENST00000571277 TRIOBPQ9H2D6 2365 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 RANBP2P49792 3224 aaKnown RBP13.73□□□□□ -0.21
LITAF-206ENST00000571277 PRKAB2O43741 272 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 SMARCA5O60264 1052 aaPredicted RBP13.73□□□□□ -0.21
LITAF-206ENST00000571277 CNMDO75829 334 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 HMGCRP04035 888 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 POLR3DP05423 398 aaPredicted RBP13.73□□□□□ -0.21
LITAF-206ENST00000571277 CYP2D6P10635 497 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 VCAM1P19320 739 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 ERVK-9P63128 1117 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 ERVK-24P63145 666 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 TRIM32Q13049 653 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 SEPT2Q15019 361 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 TRIB2Q92519 343 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 USP6NLQ92738 828 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 DEFB118Q96PH6 123 aa13.73□□□□□ -0.21
LITAF-206ENST00000571277 MYH8P13535 1937 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 RLFQ13129 1914 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 A0A1W2PRG0 241 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
LITAF-206ENST00000571277 MBD4O95243 580 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 USP17L24Q0WX57 530 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 SLC44A5Q8NCS7 719 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
LITAF-206ENST00000571277 FEZ1Q99689 392 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■■□□□ 13.1
LITAF-206ENST00000571277 CABP5Q9NP86 173 aa13.72□□□□□ -0.21
LITAF-206ENST00000571277 ALPK3Q96L96 1907 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 XRCC5P13010 732 aaKnown RBP13.71□□□□□ -0.21
LITAF-206ENST00000571277 CAPN2P17655 700 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 MAPK4P31152 587 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 USP14P54578 494 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 UBE3CQ15386 1083 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 MORN1Q5T089 497 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 MAP3K21Q5TCX8 1036 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 DYNLL2Q96FJ2 89 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 PAGR1Q9BTK6 254 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
LITAF-206ENST00000571277 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 ATP8A2Q9NTI2 1148 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
LITAF-206ENST00000571277 RABGAP1Q9Y3P9 1069 aa13.71□□□□□ -0.21
LITAF-206ENST00000571277 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 RPTORQ8N122 1335 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
LITAF-206ENST00000571277 CYP2B6P20813 491 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 KIAA1755Q5JYT7 1200 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 C12orf60Q5U649 245 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 SIAH1Q8IUQ4 282 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 SOCS4Q8WXH5 440 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 NUDT12Q9BQG2 462 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 PUS7LQ9H0K6 701 aaKnown RBP13.7□□□□□ -0.22
LITAF-206ENST00000571277 BTBD7Q9P203 1132 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
LITAF-206ENST00000571277 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
LITAF-206ENST00000571277 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
LITAF-206ENST00000571277 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
LITAF-206ENST00000571277 TMEM179Q6ZVK1 233 aa13.69□□□□□ -0.22
LITAF-206ENST00000571277 PLEKHH3Q7Z736 793 aa13.69□□□□□ -0.22
LITAF-206ENST00000571277 DIS3LQ8TF46 1054 aaKnown RBP13.69□□□□□ -0.22
LITAF-206ENST00000571277 DPF3Q92784 378 aa13.69□□□□□ -0.22
LITAF-206ENST00000571277 RPAP3Q9H6T3 665 aaPredicted RBP13.69□□□□□ -0.22
LITAF-206ENST00000571277 HMX1Q9NP08 348 aaPredicted RBP13.69□□□□□ -0.22
LITAF-206ENST00000571277 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
LITAF-206ENST00000571277 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
LITAF-206ENST00000571277 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
LITAF-206ENST00000571277 USP17L21D6R901 530 aa13.68□□□□□ -0.22
LITAF-206ENST00000571277 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
LITAF-206ENST00000571277 AKR1B1P15121 316 aa13.68□□□□□ -0.22
LITAF-206ENST00000571277 FXR1P51114 621 aaKnown RBP eCLIP13.68□□□□□ -0.22
LITAF-206ENST00000571277 CCL14Q16627 93 aa13.68□□□□□ -0.22
LITAF-206ENST00000571277 CLEC10AQ8IUN9 316 aa13.68□□□□□ -0.22
LITAF-206ENST00000571277 PAWRQ96IZ0 340 aaKnown RBP13.68□□□□□ -0.22
LITAF-206ENST00000571277 GREB1LQ9C091 1923 aaPredicted RBP13.68□□□□□ -0.22
LITAF-206ENST00000571277 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
LITAF-206ENST00000571277 RGS2P41220 211 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 CDK8P49336 464 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
LITAF-206ENST00000571277 TSHZ3Q63HK5 1081 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 CTR9Q6PD62 1173 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 KBTBD3Q8NAB2 608 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 ANKLE1Q8NAG6 615 aa13.67□□□□□ -0.22
LITAF-206ENST00000571277 STRBPQ96SI9 672 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms