RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 USP5P45974 858 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 GUCY1B3Q02153 619 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 PDE4BQ07343 736 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 ZNF654Q8IZM8 581 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 WASF1Q92558 559 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 ALG1Q9BT22 464 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 IDI2Q9BXS1 227 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 MCM9Q9NXL9 1143 aa20.12■□□□□ 0.81
RPAIN-208ENST00000571043 GOLGA6L4A6NEF3 574 aa20.11■□□□□ 0.81
RPAIN-208ENST00000571043 SMIM22K7EJ46 135 aa20.11■□□□□ 0.81
RPAIN-208ENST00000571043 MYO1BO43795 1136 aa20.11■□□□□ 0.81
RPAIN-208ENST00000571043 RANBP6O60518 1105 aaKnown RBP20.11■□□□□ 0.81
RPAIN-208ENST00000571043 HIRAP54198 1017 aaPredicted RBP20.11■□□□□ 0.81
RPAIN-208ENST00000571043 SSRP1Q08945 709 aaKnown RBP20.11■□□□□ 0.81
RPAIN-208ENST00000571043 SPDYE2Q495Y8 402 aa20.11■□□□□ 0.81
RPAIN-208ENST00000571043 C12orf60Q5U649 245 aa20.11■□□□□ 0.81
RPAIN-208ENST00000571043 TRPM4Q8TD43 1214 aa20.11■□□□□ 0.81
RPAIN-208ENST00000571043 TGFBRAP1Q8WUH2 860 aa20.11■□□□□ 0.81
RPAIN-208ENST00000571043 ZNF70Q9UC06 446 aaPredicted RBP20.11■□□□□ 0.81
RPAIN-208ENST00000571043 IQCA1LA6NCM1 817 aa20.1■□□□□ 0.81
RPAIN-208ENST00000571043 NPM3O75607 178 aaKnown RBP20.1■□□□□ 0.81
RPAIN-208ENST00000571043 AMOTL1Q8IY63 956 aa20.1■□□□□ 0.81
RPAIN-208ENST00000571043 CCDC144CPQ8IYA2 1237 aa20.1■□□□□ 0.81
RPAIN-208ENST00000571043 ENAHQ8N8S7 591 aaPredicted RBP20.1■□□□□ 0.81
RPAIN-208ENST00000571043 FANCBQ8NB91 859 aa20.1■□□□□ 0.81
RPAIN-208ENST00000571043 MYH1P12882 1939 aa20.1■□□□□ 0.81
RPAIN-208ENST00000571043 ROBO3Q96MS0 1386 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 CALM1P0DP23 149 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 CALM2P0DP24 149 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 CALM3P0DP25 149 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 CYP2D6P10635 497 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 IFIT1BQ5T764 474 aaKnown RBP20.09■□□□□ 0.81
RPAIN-208ENST00000571043 FKBP1CQ5VVH2 108 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 OTUD7BQ6GQQ9 843 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
RPAIN-208ENST00000571043 PHKBQ93100 1093 aa20.09■□□□□ 0.81
RPAIN-208ENST00000571043 PRDM1O75626 825 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 EPHX2P34913 555 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 NASPP49321 788 aaPredicted RBP20.08■□□□□ 0.81
RPAIN-208ENST00000571043 KIF23Q02241 960 aaPredicted RBP20.08■□□□□ 0.81
RPAIN-208ENST00000571043 NFIAQ12857 509 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 CATIPQ7Z7H3 387 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 TRIM22Q8IYM9 498 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 USP28Q96RU2 1077 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 PANK2Q9BZ23 570 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 RBSNQ9H1K0 784 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 TSPY26PQ9H489 355 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 TAF1DQ9H5J8 278 aaPredicted RBP20.08■□□□□ 0.81
RPAIN-208ENST00000571043 RTEL1Q9NZ71 1219 aa20.08■□□□□ 0.81
RPAIN-208ENST00000571043 CLRN2A0PK11 232 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 DDAH1O94760 285 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 CACNB3P54284 484 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 TRIM29Q14134 588 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 MAPKAPK5Q8IW41 473 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 PGBD1Q96JS3 809 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 SLC26A6Q9BXS9 759 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 DDX4Q9NQI0 724 aaKnown RBP20.07■□□□□ 0.8
RPAIN-208ENST00000571043 RBM28Q9NW13 759 aaKnown RBP20.07■□□□□ 0.8
RPAIN-208ENST00000571043 TMOD2Q9NZR1 351 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 FAM198AQ9UFP1 575 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 ENTPD3O75355 529 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-208ENST00000571043 KRT40Q6A162 431 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 NBPF11Q86T75 865 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 CRACR2BQ8N4Y2 399 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-208ENST00000571043 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
RPAIN-208ENST00000571043 DDX19AQ9NUU7 478 aaKnown RBP20.07■□□□□ 0.8
RPAIN-208ENST00000571043 FLT1P17948 1338 aa20.06■□□□□ 0.8
RPAIN-208ENST00000571043 DEXIO95424 95 aa20.06■□□□□ 0.8
RPAIN-208ENST00000571043 CCDC178Q5BJE1 867 aa20.06■□□□□ 0.8
RPAIN-208ENST00000571043 MYSM1Q5VVJ2 828 aa20.06■□□□□ 0.8
RPAIN-208ENST00000571043 RRAGCQ9HB90 399 aa20.06■□□□□ 0.8
RPAIN-208ENST00000571043 YEATS4O95619 227 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 LIG1P18858 919 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 EVX2Q03828 476 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 PICALMQ13492 652 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 FAM83AQ86UY5 434 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 PNMA8AQ86V59 439 aaPredicted RBP20.05■□□□□ 0.8
RPAIN-208ENST00000571043 ZC3H15Q8WU90 426 aaKnown RBP20.05■□□□□ 0.8
RPAIN-208ENST00000571043 RNF26Q9BY78 433 aaPredicted RBP20.05■□□□□ 0.8
RPAIN-208ENST00000571043 OSBPL5Q9H0X9 879 aaPredicted RBP20.05■□□□□ 0.8
RPAIN-208ENST00000571043 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 PGAP2Q9UHJ9 254 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 ASTN2O75129 1339 aaPredicted RBP20.05■□□□□ 0.8
RPAIN-208ENST00000571043 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
RPAIN-208ENST00000571043 TSPY2A6NKD2 308 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 TROAPQ12815 778 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 TPRNQ4KMQ1 711 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 ZFPM1Q8IX07 1006 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 BICD2Q8TD16 824 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 FAM151AQ8WW52 585 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 ANKS1AQ92625 1134 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 AIFM3Q96NN9 605 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 VEZTQ9HBM0 779 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 ZNF287Q9HBT7 754 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 GJB4Q9NTQ9 266 aa20.04■□□□□ 0.8
RPAIN-208ENST00000571043 PITPNM2Q9BZ72 1349 aa20.03■□□□□ 0.8
RPAIN-208ENST00000571043 KIF28PB7ZC32 967 aa20.03■□□□□ 0.8
RPAIN-208ENST00000571043 TCP10L2B9ZVM9 353 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms