RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 WDR66Q8TBY9 1149 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 FAM200AQ8TCP9 573 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 USP28Q96RU2 1077 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 RIOK1Q9BRS2 568 aaKnown RBP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 KINO60870 393 aaKnown RBP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 TPM3P06753 285 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 ME1P48163 572 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 GNL2Q13823 731 aaKnown RBP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 STK38Q15208 465 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 SAFBQ15424 915 aaKnown RBP eCLIP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 COL13A1Q5TAT6 717 aaPredicted RBP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 C15orf52Q6ZUT6 534 aaKnown RBP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 CCAR1Q8IX12 1150 aaKnown RBP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 MIGA1Q8NAN2 632 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 ZNF408Q9H9D4 720 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 NOL7Q9UMY1 257 aaKnown RBP22.63■■□□□ 1.21
SPNS2-203ENST00000570979 TLL2Q9Y6L7 1015 aa22.63■■□□□ 1.21
SPNS2-203ENST00000570979 CALM1P0DP23 149 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 CALM2P0DP24 149 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 CALM3P0DP25 149 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 GSTO1P78417 241 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 FAM160A1Q05DH4 1040 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 TPRNQ4KMQ1 711 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 MYSM1Q5VVJ2 828 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 FBXW7Q969H0 707 aa22.62■■□□□ 1.21
SPNS2-203ENST00000570979 ADM5C9JUS6 153 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 PRKAB2O43741 272 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 TYRO3Q06418 890 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 KRT26Q7Z3Y9 468 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 MICU3Q86XE3 530 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 IQCA1Q86XH1 822 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 MAP7D2Q96T17 732 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 FMNL1O95466 1100 aaPredicted RBP22.61■■□□□ 1.21
SPNS2-203ENST00000570979 PTMAP06454 111 aaKnown RBP22.61■■□□□ 1.21
SPNS2-203ENST00000570979 USP17L8P0C7I0 530 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 KIF23Q02241 960 aaPredicted RBP22.61■■□□□ 1.21
SPNS2-203ENST00000570979 CYP4F22Q6NT55 531 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 NSUN4Q96CB9 384 aaKnown RBP22.61■■□□□ 1.21
SPNS2-203ENST00000570979 GGA3Q9NZ52 723 aa22.61■■□□□ 1.21
SPNS2-203ENST00000570979 IQSEC3Q9UPP2 1182 aaPredicted RBP22.61■■□□□ 1.21
SPNS2-203ENST00000570979 LDHCP07864 332 aa22.6■■□□□ 1.21
SPNS2-203ENST00000570979 FGRP09769 529 aa22.6■■□□□ 1.21
SPNS2-203ENST00000570979 XBP1P17861 261 aa22.6■■□□□ 1.21
SPNS2-203ENST00000570979 GUCY1B3Q02153 619 aa22.6■■□□□ 1.21
SPNS2-203ENST00000570979 RTN1Q16799 776 aa22.6■■□□□ 1.21
SPNS2-203ENST00000570979 RRP12Q5JTH9 1297 aaKnown RBP22.6■■□□□ 1.21
SPNS2-203ENST00000570979 ZNF804AQ7Z570 1209 aa22.6■■□□□ 1.21
SPNS2-203ENST00000570979 LINC00301Q8NCQ3 95 aa22.6■■□□□ 1.21
SPNS2-203ENST00000570979 MRPS27Q92552 414 aaKnown RBP22.6■■□□□ 1.21
SPNS2-203ENST00000570979 MYH13Q9UKX3 1938 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 MINDY4BA8MYZ0 360 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 NR1I2O75469 434 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 FOSBP53539 338 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 NTRK3Q16288 839 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 STRIP1Q5VSL9 837 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 SAPCD2Q86UD0 394 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 CD209Q9NNX6 404 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 MYOZ2Q9NPC6 264 aa22.59■■□□□ 1.21
SPNS2-203ENST00000570979 ARPP21Q9UBL0 812 aaPredicted RBP22.59■■□□□ 1.21
SPNS2-203ENST00000570979 GOLGA6L6A8MZA4 724 aa22.58■■□□□ 1.21
SPNS2-203ENST00000570979 SPTLC2O15270 562 aa22.58■■□□□ 1.21
SPNS2-203ENST00000570979 DEXIO95424 95 aa22.58■■□□□ 1.21
SPNS2-203ENST00000570979 CEBPZQ03701 1054 aaKnown RBP22.58■■□□□ 1.21
SPNS2-203ENST00000570979 SBK1Q52WX2 424 aa22.58■■□□□ 1.21
SPNS2-203ENST00000570979 CCDC178Q5BJE1 867 aa22.58■■□□□ 1.21
SPNS2-203ENST00000570979 PAXIP1Q6ZW49 1069 aaPredicted RBP22.58■■□□□ 1.21
SPNS2-203ENST00000570979 DCPSQ96C86 337 aaKnown RBP22.58■■□□□ 1.21
SPNS2-203ENST00000570979 CAPNS2Q96L46 248 aa22.58■■□□□ 1.21
SPNS2-203ENST00000570979 RBM28Q9NW13 759 aaKnown RBP22.58■■□□□ 1.21
SPNS2-203ENST00000570979 FOXN1O15353 648 aa22.58■■□□□ 1.2
SPNS2-203ENST00000570979 GTF2IP78347 998 aa22.58■■□□□ 1.2
SPNS2-203ENST00000570979 ANO1Q5XXA6 986 aa22.58■■□□□ 1.2
SPNS2-203ENST00000570979 KRT40Q6A162 431 aa22.58■■□□□ 1.2
SPNS2-203ENST00000570979 NOL10Q9BSC4 688 aaKnown RBP22.58■■□□□ 1.2
SPNS2-203ENST00000570979 USP25Q9UHP3 1055 aa22.58■■□□□ 1.2
SPNS2-203ENST00000570979 ORC4O43929 436 aa22.57■■□□□ 1.2
SPNS2-203ENST00000570979 U2AF2P26368 475 aaKnown RBP eCLIP22.57■■□□□ 1.2
SPNS2-203ENST00000570979 AKAP17AQ02040 695 aaKnown RBP22.57■■□□□ 1.2
SPNS2-203ENST00000570979 MECOMQ03112 1051 aa22.57■■□□□ 1.2
SPNS2-203ENST00000570979 GRM1Q13255 1194 aa22.57■■□□□ 1.2
SPNS2-203ENST00000570979 CAMK4Q16566 473 aa22.57■■□□□ 1.2
SPNS2-203ENST00000570979 AMOTL1Q8IY63 956 aa22.57■■□□□ 1.2
SPNS2-203ENST00000570979 SCAF8Q9UPN6 1271 aaKnown RBP22.57■■□□□ 1.2
SPNS2-203ENST00000570979 MAST2Q6P0Q8 1798 aa22.57■■□□□ 1.2
SPNS2-203ENST00000570979 PPP6R2O75170 966 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 BAG3O95817 575 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 CDC27P30260 824 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 PDE4BQ07343 736 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 ANGEL2Q5VTE6 544 aaKnown RBP22.56■■□□□ 1.2
SPNS2-203ENST00000570979 DZIP1Q86YF9 867 aaKnown RBP22.56■■□□□ 1.2
SPNS2-203ENST00000570979 FSIP1Q8NA03 581 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 FANCBQ8NB91 859 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 WBP1LQ9NX94 342 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 ZKSCAN5Q9Y2L8 839 aa22.56■■□□□ 1.2
SPNS2-203ENST00000570979 COL1A1P02452 1464 aaPredicted RBP22.56■■□□□ 1.2
SPNS2-203ENST00000570979 CATIPQ7Z7H3 387 aa22.55■■□□□ 1.2
SPNS2-203ENST00000570979 ZNF654Q8IZM8 581 aa22.55■■□□□ 1.2
SPNS2-203ENST00000570979 PCDHA7Q9UN72 937 aa22.55■■□□□ 1.2
SPNS2-203ENST00000570979 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
SPNS2-203ENST00000570979 SLC39A14Q15043 492 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms