RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 PRKAB2O43741 272 aa25.4■■□□□ 1.66
RPA1-202ENST00000570451 FARP2O94887 1054 aaPredicted RBP25.4■■□□□ 1.66
RPA1-202ENST00000570451 HMGCRP04035 888 aa25.4■■□□□ 1.66
RPA1-202ENST00000570451 ERVK-9P63128 1117 aa25.4■■□□□ 1.66
RPA1-202ENST00000570451 ERVK-24P63145 666 aa25.4■■□□□ 1.66
RPA1-202ENST00000570451 SEPT2Q15019 361 aa25.4■■□□□ 1.66
RPA1-202ENST00000570451 GTF3C2Q8WUA4 911 aaPredicted RBP25.4■■□□□ 1.66
RPA1-202ENST00000570451 CWC22Q9HCG8 908 aaKnown RBP25.4■■□□□ 1.66
RPA1-202ENST00000570451 USP17L15C9J2P7 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L13C9JLJ4 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L11C9JVI0 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L18D6R9N7 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L22D6RA61 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L17D6RBQ6 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L19D6RCP7 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L20D6RJB6 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 GABPAQ06546 454 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 USP17L24Q0WX57 530 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 C12orf42Q96LP6 360 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 KIAA1683Q9H0B3 1180 aa25.39■■□□□ 1.66
RPA1-202ENST00000570451 H0YGN5 161 aa25.38■■□□□ 1.65
RPA1-202ENST00000570451 CHGBP05060 677 aa25.38■■□□□ 1.65
RPA1-202ENST00000570451 VCAM1P19320 739 aa25.38■■□□□ 1.65
RPA1-202ENST00000570451 CYP2B6P20813 491 aa25.38■■□□□ 1.65
RPA1-202ENST00000570451 MAPK4P31152 587 aa25.38■■□□□ 1.65
RPA1-202ENST00000570451 HABP4Q5JVS0 413 aaKnown RBP25.38■■□□□ 1.65
RPA1-202ENST00000570451 SLC44A5Q8NCS7 719 aa25.38■■□□□ 1.65
RPA1-202ENST00000570451 HTATIP2Q9BUP3 242 aa25.38■■□□□ 1.65
RPA1-202ENST00000570451 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.38■■□□□ 1.65
RPA1-202ENST00000570451 GUCY1A2P33402 732 aa25.37■■□□□ 1.65
RPA1-202ENST00000570451 Q3C1V9 767 aa25.37■■□□□ 1.65
RPA1-202ENST00000570451 DYNLL2Q96FJ2 89 aa25.37■■□□□ 1.65
RPA1-202ENST00000570451 NUDT12Q9BQG2 462 aa25.37■■□□□ 1.65
RPA1-202ENST00000570451 PORCNQ9H237 461 aa25.37■■□□□ 1.65
RPA1-202ENST00000570451 PAK6Q9NQU5 681 aaPredicted RBP25.37■■□□□ 1.65
RPA1-202ENST00000570451 TRIM32Q13049 653 aa25.36■■□□□ 1.65
RPA1-202ENST00000570451 ZSCAN25Q6NSZ9 544 aa25.36■■□□□ 1.65
RPA1-202ENST00000570451 CATSPERGQ6ZRH7 1159 aa25.36■■□□□ 1.65
RPA1-202ENST00000570451 UBE2Q1Q7Z7E8 422 aa25.36■■□□□ 1.65
RPA1-202ENST00000570451 SOCS4Q8WXH5 440 aa25.36■■□□□ 1.65
RPA1-202ENST00000570451 ATP8A2Q9NTI2 1148 aa25.36■■□□□ 1.65
RPA1-202ENST00000570451 UBE3CQ15386 1083 aa25.35■■□□□ 1.65
RPA1-202ENST00000570451 AMOTL1Q8IY63 956 aa25.35■■□□□ 1.65
RPA1-202ENST00000570451 TRIB2Q92519 343 aa25.35■■□□□ 1.65
RPA1-202ENST00000570451 DDRGK1Q96HY6 314 aa25.35■■□□□ 1.65
RPA1-202ENST00000570451 RPAP3Q9H6T3 665 aaPredicted RBP25.35■■□□□ 1.65
RPA1-202ENST00000570451 ECHDC1Q9NTX5 307 aa25.35■■□□□ 1.65
RPA1-202ENST00000570451 SWAP70Q9UH65 585 aa25.35■■□□□ 1.65
RPA1-202ENST00000570451 PLXNB2O15031 1838 aa25.35■■□□□ 1.65
RPA1-202ENST00000570451 CYP2D7A0A087X1C5 515 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 WDR78Q5VTH9 848 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 POTEEQ6S8J3 1075 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 GPR142Q7Z601 462 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 PLEKHH3Q7Z736 793 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 GPATCH3Q96I76 525 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 RABGAP1Q9Y3P9 1069 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 SLC4A4Q9Y6R1 1079 aa25.34■■□□□ 1.65
RPA1-202ENST00000570451 TMEM179Q6ZVK1 233 aa25.33■■□□□ 1.65
RPA1-202ENST00000570451 DCTPP1Q9H773 170 aa25.33■■□□□ 1.65
RPA1-202ENST00000570451 HMX1Q9NP08 348 aaPredicted RBP25.33■■□□□ 1.65
RPA1-202ENST00000570451 COLQQ9Y215 455 aaPredicted RBP25.33■■□□□ 1.65
RPA1-202ENST00000570451 MYH7P12883 1935 aa25.33■■□□□ 1.65
RPA1-202ENST00000570451 BAZ2AQ9UIF9 1905 aaKnown RBP25.33■■□□□ 1.65
RPA1-202ENST00000570451 CNMDO75829 334 aa25.32■■□□□ 1.64
RPA1-202ENST00000570451 CCNA1P78396 465 aa25.32■■□□□ 1.64
RPA1-202ENST00000570451 TSHZ3Q63HK5 1081 aa25.32■■□□□ 1.64
RPA1-202ENST00000570451 TANGO6Q9C0B7 1094 aa25.32■■□□□ 1.64
RPA1-202ENST00000570451 PUS7LQ9H0K6 701 aaKnown RBP25.32■■□□□ 1.64
RPA1-202ENST00000570451 RPTORQ8N122 1335 aa25.32■■□□□ 1.64
RPA1-202ENST00000570451 A0A1W2PRG0 241 aa25.31■■□□□ 1.64
RPA1-202ENST00000570451 USP17L12C9JPN9 530 aa25.31■■□□□ 1.64
RPA1-202ENST00000570451 USP17L21D6R901 530 aa25.31■■□□□ 1.64
RPA1-202ENST00000570451 AKR1B1P15121 316 aa25.31■■□□□ 1.64
RPA1-202ENST00000570451 ZKSCAN1P17029 563 aaPredicted RBP25.31■■□□□ 1.64
RPA1-202ENST00000570451 RGS2P41220 211 aa25.31■■□□□ 1.64
RPA1-202ENST00000570451 CLEC10AQ8IUN9 316 aa25.31■■□□□ 1.64
RPA1-202ENST00000570451 CRISPLD2Q9H0B8 497 aa25.31■■□□□ 1.64
RPA1-202ENST00000570451 TRIOBPQ9H2D6 2365 aa25.3■■□□□ 1.64
RPA1-202ENST00000570451 MYH8P13535 1937 aa25.3■■□□□ 1.64
RPA1-202ENST00000570451 SMIM22K7EJ46 135 aa25.3■■□□□ 1.64
RPA1-202ENST00000570451 XRCC5P13010 732 aaKnown RBP25.3■■□□□ 1.64
RPA1-202ENST00000570451 PRKAR2AP13861 404 aaKnown RBP25.3■■□□□ 1.64
RPA1-202ENST00000570451 CAPN2P17655 700 aa25.3■■□□□ 1.64
RPA1-202ENST00000570451 C12orf60Q5U649 245 aa25.3■■□□□ 1.64
RPA1-202ENST00000570451 SPDYE16A6NNV3 312 aaPredicted RBP25.29■■□□□ 1.64
RPA1-202ENST00000570451 GLRX3O76003 335 aaKnown RBP25.29■■□□□ 1.64
RPA1-202ENST00000570451 CDK8P49336 464 aa25.29■■□□□ 1.64
RPA1-202ENST00000570451 ICA1Q05084 483 aa25.29■■□□□ 1.64
RPA1-202ENST00000570451 MORN1Q5T089 497 aa25.29■■□□□ 1.64
RPA1-202ENST00000570451 TRMT44Q8IYL2 757 aaKnown RBP25.29■■□□□ 1.64
RPA1-202ENST00000570451 PAWRQ96IZ0 340 aaKnown RBP25.29■■□□□ 1.64
RPA1-202ENST00000570451 ARHGEF10LQ9HCE6 1279 aa25.29■■□□□ 1.64
RPA1-202ENST00000570451 BTBD7Q9P203 1132 aa25.29■■□□□ 1.64
RPA1-202ENST00000570451 NR2E3Q9Y5X4 410 aa25.29■■□□□ 1.64
RPA1-202ENST00000570451 RANBP2P49792 3224 aaKnown RBP25.29■■□□□ 1.64
RPA1-202ENST00000570451 CCL14Q16627 93 aa25.28■■□□□ 1.64
RPA1-202ENST00000570451 CHRDL2Q6WN34 429 aa25.28■■□□□ 1.64
RPA1-202ENST00000570451 DIS3LQ8TF46 1054 aaKnown RBP25.28■■□□□ 1.64
RPA1-202ENST00000570451 USP6NLQ92738 828 aa25.28■■□□□ 1.64
RPA1-202ENST00000570451 APBA2Q99767 749 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms