RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 EAF2Q96CJ1 260 aaPredicted RBP25.62■■□□□ 1.69
PKD1-240ENST00000570253 C12orf42Q96LP6 360 aa25.62■■□□□ 1.69
PKD1-240ENST00000570253 IVNS1ABPQ9Y6Y0 642 aa25.62■■□□□ 1.69
PKD1-240ENST00000570253 TTF1Q15361 905 aaPredicted RBP25.61■■□□□ 1.69
PKD1-240ENST00000570253 ABCB5Q2M3G0 1257 aa25.61■■□□□ 1.69
PKD1-240ENST00000570253 SHROOM1Q2M3G4 852 aaPredicted RBP25.61■■□□□ 1.69
PKD1-240ENST00000570253 PORCNQ9H237 461 aa25.61■■□□□ 1.69
PKD1-240ENST00000570253 CACNB2Q08289 660 aaPredicted RBP25.6■■□□□ 1.69
PKD1-240ENST00000570253 Q3C1V9 767 aa25.6■■□□□ 1.69
PKD1-240ENST00000570253 MFSD14CQ5VZR4 134 aa25.6■■□□□ 1.69
PKD1-240ENST00000570253 AACSQ86V21 672 aa25.6■■□□□ 1.69
PKD1-240ENST00000570253 GDF15Q99988 308 aa25.6■■□□□ 1.69
PKD1-240ENST00000570253 PEX10O60683 326 aa25.59■■□□□ 1.69
PKD1-240ENST00000570253 POLR3DP05423 398 aaPredicted RBP25.59■■□□□ 1.69
PKD1-240ENST00000570253 HNRNPUQ00839 825 aaKnown RBP eCLIP25.59■■□□□ 1.69
PKD1-240ENST00000570253 MAP2K5Q13163 448 aa25.59■■□□□ 1.69
PKD1-240ENST00000570253 MORN1Q5T089 497 aa25.59■■□□□ 1.69
PKD1-240ENST00000570253 KIAA1683Q9H0B3 1180 aa25.59■■□□□ 1.69
PKD1-240ENST00000570253 SZT2Q5T011 3432 aa25.59■■□□□ 1.69
PKD1-240ENST00000570253 EDC3Q96F86 508 aaKnown RBP25.58■■□□□ 1.69
PKD1-240ENST00000570253 MAGEB6P1A0A0J9YX57 407 aa25.57■■□□□ 1.68
PKD1-240ENST00000570253 SYN1P17600 705 aa25.57■■□□□ 1.68
PKD1-240ENST00000570253 CATSPERGQ6ZRH7 1159 aa25.57■■□□□ 1.68
PKD1-240ENST00000570253 USP6NLQ92738 828 aa25.57■■□□□ 1.68
PKD1-240ENST00000570253 CRNKL1Q9BZJ0 848 aaKnown RBP25.57■■□□□ 1.68
PKD1-240ENST00000570253 VCAM1P19320 739 aa25.56■■□□□ 1.68
PKD1-240ENST00000570253 CEP85Q6P2H3 762 aa25.56■■□□□ 1.68
PKD1-240ENST00000570253 SLC17A8Q8NDX2 589 aa25.56■■□□□ 1.68
PKD1-240ENST00000570253 LRCH3Q96II8 777 aa25.56■■□□□ 1.68
PKD1-240ENST00000570253 EXOC6BQ9Y2D4 811 aa25.56■■□□□ 1.68
PKD1-240ENST00000570253 SLC15A5A6NIM6 579 aa25.55■■□□□ 1.68
PKD1-240ENST00000570253 MSCO60682 206 aa25.55■■□□□ 1.68
PKD1-240ENST00000570253 CCND3P30281 292 aaPredicted RBP25.55■■□□□ 1.68
PKD1-240ENST00000570253 MNX1P50219 401 aaPredicted RBP25.55■■□□□ 1.68
PKD1-240ENST00000570253 CCL14Q16627 93 aa25.55■■□□□ 1.68
PKD1-240ENST00000570253 GPR153Q6NV75 609 aa25.55■■□□□ 1.68
PKD1-240ENST00000570253 UBE2OQ9C0C9 1292 aaKnown RBP25.55■■□□□ 1.68
PKD1-240ENST00000570253 ANTXR1Q9H6X2 564 aa25.55■■□□□ 1.68
PKD1-240ENST00000570253 NDUFB9Q9Y6M9 179 aa25.55■■□□□ 1.68
PKD1-240ENST00000570253 MPHOSPH10O00566 681 aaKnown RBP25.54■■□□□ 1.68
PKD1-240ENST00000570253 SOX1O00570 391 aaPredicted RBP25.54■■□□□ 1.68
PKD1-240ENST00000570253 MS4A1P11836 297 aa25.54■■□□□ 1.68
PKD1-240ENST00000570253 MAGEA10P43363 369 aaPredicted RBP25.54■■□□□ 1.68
PKD1-240ENST00000570253 ATP2B2Q01814 1243 aa25.54■■□□□ 1.68
PKD1-240ENST00000570253 LBX2Q6XYB7 198 aa25.54■■□□□ 1.68
PKD1-240ENST00000570253 TDHQ8IZJ6 230 aa25.54■■□□□ 1.68
PKD1-240ENST00000570253 NAV1Q8NEY1 1877 aa25.53■■□□□ 1.68
PKD1-240ENST00000570253 PTPREP23469 700 aa25.53■■□□□ 1.68
PKD1-240ENST00000570253 CLASRPQ8N2M8 674 aaKnown RBP25.53■■□□□ 1.68
PKD1-240ENST00000570253 RPAP3Q9H6T3 665 aaPredicted RBP25.53■■□□□ 1.68
PKD1-240ENST00000570253 PFASO15067 1338 aa25.53■■□□□ 1.68
PKD1-240ENST00000570253 RLBP1P12271 317 aa25.52■■□□□ 1.68
PKD1-240ENST00000570253 CNGA1P29973 690 aa25.52■■□□□ 1.68
PKD1-240ENST00000570253 SLC9C2Q5TAH2 1124 aa25.52■■□□□ 1.68
PKD1-240ENST00000570253 MCM9Q9NXL9 1143 aa25.52■■□□□ 1.68
PKD1-240ENST00000570253 CNMDO75829 334 aa25.51■■□□□ 1.67
PKD1-240ENST00000570253 COL6A1P12109 1028 aa25.51■■□□□ 1.67
PKD1-240ENST00000570253 SHMT1P34896 483 aa25.51■■□□□ 1.67
PKD1-240ENST00000570253 LRIT3Q3SXY7 679 aa25.51■■□□□ 1.67
PKD1-240ENST00000570253 ACER1Q8TDN7 264 aa25.51■■□□□ 1.67
PKD1-240ENST00000570253 RIOK1Q9BRS2 568 aaKnown RBP25.51■■□□□ 1.67
PKD1-240ENST00000570253 IL1RAPL2Q9NP60 686 aa25.51■■□□□ 1.67
PKD1-240ENST00000570253 HOXC10Q9NYD6 342 aa25.51■■□□□ 1.67
PKD1-240ENST00000570253 HMMRO75330 724 aa25.5■■□□□ 1.67
PKD1-240ENST00000570253 IFIT2P09913 472 aaKnown RBP25.5■■□□□ 1.67
PKD1-240ENST00000570253 PLCD1P51178 756 aa25.5■■□□□ 1.67
PKD1-240ENST00000570253 LHX8Q68G74 356 aa25.5■■□□□ 1.67
PKD1-240ENST00000570253 RHPN1Q8TCX5 695 aa25.5■■□□□ 1.67
PKD1-240ENST00000570253 SPDYE16A6NNV3 312 aaPredicted RBP25.49■■□□□ 1.67
PKD1-240ENST00000570253 GRB14Q14449 540 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 DPP9Q86TI2 863 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 AMOTL1Q8IY63 956 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 KIF1BPQ96EK5 621 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 DNAJC2Q99543 621 aaKnown RBP25.49■■□□□ 1.67
PKD1-240ENST00000570253 TANGO6Q9C0B7 1094 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 SH2D4AQ9H788 454 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 SLC5A4Q9NY91 659 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 PRKAG2Q9UGJ0 569 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 SWAP70Q9UH65 585 aa25.49■■□□□ 1.67
PKD1-240ENST00000570253 DDX20Q9UHI6 824 aaKnown RBP25.49■■□□□ 1.67
PKD1-240ENST00000570253 HOXC6P09630 235 aa25.48■■□□□ 1.67
PKD1-240ENST00000570253 PDE6AP16499 860 aa25.48■■□□□ 1.67
PKD1-240ENST00000570253 COG2Q14746 738 aa25.48■■□□□ 1.67
PKD1-240ENST00000570253 SEPT2Q15019 361 aa25.48■■□□□ 1.67
PKD1-240ENST00000570253 DEFB123Q8N688 67 aa25.48■■□□□ 1.67
PKD1-240ENST00000570253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.48■■□□□ 1.67
PKD1-240ENST00000570253 LBHD1Q9BQE6 289 aaPredicted RBP25.48■■□□□ 1.67
PKD1-240ENST00000570253 SENP6Q9GZR1 1112 aaPredicted RBP25.48■■□□□ 1.67
PKD1-240ENST00000570253 BTBD7Q9P203 1132 aa25.48■■□□□ 1.67
PKD1-240ENST00000570253 ZNF532Q9HCE3 1301 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 STRNO43815 780 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 LRRC26Q2I0M4 334 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 POTEEQ6S8J3 1075 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 TMEM179Q6ZVK1 233 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 LPAR1Q92633 364 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 ARHGEF10LQ9HCE6 1279 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 FRMPD3Q5JV73 1810 aa25.47■■□□□ 1.67
PKD1-240ENST00000570253 APBB1O00213 710 aa25.46■■□□□ 1.67
PKD1-240ENST00000570253 GOLIM4O00461 696 aa25.46■■□□□ 1.67
PKD1-240ENST00000570253 MB21D1Q8N884 522 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms