RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 ANKRD23Q86SG2 305 aa23.42■■□□□ 1.34
NAE1-222ENST00000569963 PROCA1Q8NCQ7 364 aaPredicted RBP23.42■■□□□ 1.34
NAE1-222ENST00000569963 STAG1Q8WVM7 1258 aa23.42■■□□□ 1.34
NAE1-222ENST00000569963 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.42■■□□□ 1.34
NAE1-222ENST00000569963 BTBD19C9JJ37 291 aa23.41■■□□□ 1.34
NAE1-222ENST00000569963 HAND2P61296 217 aa23.41■■□□□ 1.34
NAE1-222ENST00000569963 AKNAD1Q5T1N1 836 aa23.41■■□□□ 1.34
NAE1-222ENST00000569963 NBPF3Q9H094 633 aa23.41■■□□□ 1.34
NAE1-222ENST00000569963 KIAA1683Q9H0B3 1180 aa23.41■■□□□ 1.34
NAE1-222ENST00000569963 RNF41Q9H4P4 317 aaPredicted RBP23.41■■□□□ 1.34
NAE1-222ENST00000569963 TACC3Q9Y6A5 838 aa23.41■■□□□ 1.34
NAE1-222ENST00000569963 PTPRFP10586 1907 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 TRPA1O75762 1119 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 MFSD6Q6ZSS7 791 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 FAM43AQ8N2R8 423 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 NEDD1Q8NHV4 660 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 LSG1Q9H089 658 aaKnown RBP23.4■■□□□ 1.34
NAE1-222ENST00000569963 INCENPQ9NQS7 918 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 SLC45A1Q9Y2W3 748 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 LAMA4Q16363 1823 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 PLIN4Q96Q06 1357 aa23.4■■□□□ 1.34
NAE1-222ENST00000569963 GREB1LQ9C091 1923 aaPredicted RBP23.39■■□□□ 1.34
NAE1-222ENST00000569963 IGKV6D-41A0A0C4DH26 115 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 USP14P54578 494 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 HMGCS2P54868 508 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 TFAP4Q01664 338 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 ICA1Q05084 483 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 MTMR2Q13614 643 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 GPAT2Q6NUI2 795 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 USP17L2Q6R6M4 530 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 SIAH1Q8IUQ4 282 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 ARHGEF10LQ9HCE6 1279 aa23.39■■□□□ 1.33
NAE1-222ENST00000569963 TSPY3P0CV98 308 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 TSPY8P0CW00 308 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 GADL1Q6ZQY3 521 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 TBC1D10CQ8IV04 446 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 ACER1Q8TDN7 264 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 C12orf42Q96LP6 360 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 TMOD4Q9NZQ9 345 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 NYAP2Q9P242 653 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 AGTPBP1Q9UPW5 1226 aa23.38■■□□□ 1.33
NAE1-222ENST00000569963 A0A1W2PRG0 241 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 FOXN1O15353 648 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 CTCFP49711 727 aaPredicted RBP23.37■■□□□ 1.33
NAE1-222ENST00000569963 FAM47AQ5JRC9 791 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 PPP4R3BQ5MIZ7 849 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 FEZ1Q99689 392 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 SH2D4AQ9H788 454 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 ANO2Q9NQ90 1003 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 EMILIN3Q9NT22 766 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 TMX2Q9Y320 296 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 LOC285556D6RIA3 1793 aa23.37■■□□□ 1.33
NAE1-222ENST00000569963 TSPY2A6NKD2 308 aa23.36■■□□□ 1.33
NAE1-222ENST00000569963 PDHXO00330 501 aa23.36■■□□□ 1.33
NAE1-222ENST00000569963 RANBP6O60518 1105 aaKnown RBP23.36■■□□□ 1.33
NAE1-222ENST00000569963 EEF2P13639 858 aaKnown RBP23.36■■□□□ 1.33
NAE1-222ENST00000569963 NOM1Q5C9Z4 860 aaKnown RBP23.36■■□□□ 1.33
NAE1-222ENST00000569963 MTMR4Q9NYA4 1195 aa23.36■■□□□ 1.33
NAE1-222ENST00000569963 RBM8AQ9Y5S9 174 aaKnown RBP23.36■■□□□ 1.33
NAE1-222ENST00000569963 CYP21A2P08686 494 aa23.35■■□□□ 1.33
NAE1-222ENST00000569963 PABPC4Q13310 644 aaKnown RBP eCLIP23.35■■□□□ 1.33
NAE1-222ENST00000569963 MKL1Q969V6 931 aa23.35■■□□□ 1.33
NAE1-222ENST00000569963 CNNM2Q9H8M5 875 aa23.35■■□□□ 1.33
NAE1-222ENST00000569963 ZFYVE28Q9HCC9 887 aa23.35■■□□□ 1.33
NAE1-222ENST00000569963 TOMM22Q9NS69 142 aa23.35■■□□□ 1.33
NAE1-222ENST00000569963 TCP11L1Q9NUJ3 509 aa23.35■■□□□ 1.33
NAE1-222ENST00000569963 SYNPO2Q9UMS6 1093 aa23.35■■□□□ 1.33
NAE1-222ENST00000569963 TBC1D8O95759 1140 aa23.34■■□□□ 1.33
NAE1-222ENST00000569963 HOXA7P31268 230 aaPredicted RBP23.34■■□□□ 1.33
NAE1-222ENST00000569963 TAF1CQ15572 869 aaPredicted RBP23.34■■□□□ 1.33
NAE1-222ENST00000569963 RRP12Q5JTH9 1297 aaKnown RBP23.34■■□□□ 1.33
NAE1-222ENST00000569963 TREML2Q5T2D2 321 aa23.34■■□□□ 1.33
NAE1-222ENST00000569963 ESR2Q92731 530 aa23.34■■□□□ 1.33
NAE1-222ENST00000569963 CEP95Q96GE4 821 aa23.34■■□□□ 1.33
NAE1-222ENST00000569963 TTLL1O95922 423 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 HSPA8P11142 646 aaKnown RBP23.33■■□□□ 1.33
NAE1-222ENST00000569963 NOVP48745 357 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 CRHR2Q13324 411 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 NECTIN1Q15223 517 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 CLEC10AQ8IUN9 316 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 KRT23Q9C075 422 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 IL17RBQ9NRM6 502 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 GTF3C3Q9Y5Q9 886 aa23.33■■□□□ 1.33
NAE1-222ENST00000569963 NEDD4P46934 1319 aa23.33■■□□□ 1.32
NAE1-222ENST00000569963 DGKZQ13574 1117 aa23.32■■□□□ 1.32
NAE1-222ENST00000569963 ZYXQ15942 572 aaKnown RBP23.32■■□□□ 1.32
NAE1-222ENST00000569963 LPAR1Q92633 364 aa23.32■■□□□ 1.32
NAE1-222ENST00000569963 PARK7Q99497 189 aaKnown RBP23.32■■□□□ 1.32
NAE1-222ENST00000569963 VCPKMTQ9H867 229 aa23.32■■□□□ 1.32
NAE1-222ENST00000569963 CLIP2Q9UDT6 1046 aa23.32■■□□□ 1.32
NAE1-222ENST00000569963 PNMA3Q9UL41 463 aa23.32■■□□□ 1.32
NAE1-222ENST00000569963 EPB41L2O43491 1005 aaKnown RBP23.31■■□□□ 1.32
NAE1-222ENST00000569963 TLR2O60603 784 aa23.31■■□□□ 1.32
NAE1-222ENST00000569963 REC8O95072 547 aa23.31■■□□□ 1.32
NAE1-222ENST00000569963 ATP2B2Q01814 1243 aa23.31■■□□□ 1.32
NAE1-222ENST00000569963 OSBPP22059 807 aa23.3■■□□□ 1.32
NAE1-222ENST00000569963 R3HDMLQ9H3Y0 253 aa23.3■■□□□ 1.32
NAE1-222ENST00000569963 GOPCQ9HD26 462 aa23.3■■□□□ 1.32
NAE1-222ENST00000569963 TSKSQ9UJT2 592 aa23.3■■□□□ 1.32
NAE1-222ENST00000569963 USP17L15C9J2P7 530 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms