RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 DCTPP1Q9H773 170 aa27.18■■□□□ 1.94
RBFOX1-219ENST00000569895 SWAP70Q9UH65 585 aa27.18■■□□□ 1.94
RBFOX1-219ENST00000569895 GJD2Q9UKL4 321 aa27.18■■□□□ 1.94
RBFOX1-219ENST00000569895 MPHOSPH10O00566 681 aaKnown RBP27.17■■□□□ 1.94
RBFOX1-219ENST00000569895 SMARCA5O60264 1052 aaPredicted RBP27.17■■□□□ 1.94
RBFOX1-219ENST00000569895 MBD4O95243 580 aa27.17■■□□□ 1.94
RBFOX1-219ENST00000569895 ECHDC1Q9NTX5 307 aa27.17■■□□□ 1.94
RBFOX1-219ENST00000569895 RBPJLQ9UBG7 517 aa27.17■■□□□ 1.94
RBFOX1-219ENST00000569895 TFRCP02786 760 aaKnown RBP27.16■■□□□ 1.94
RBFOX1-219ENST00000569895 HMGCRP04035 888 aa27.16■■□□□ 1.94
RBFOX1-219ENST00000569895 ERVK-9P63128 1117 aa27.16■■□□□ 1.94
RBFOX1-219ENST00000569895 ERVK-24P63145 666 aa27.16■■□□□ 1.94
RBFOX1-219ENST00000569895 NUDT12Q9BQG2 462 aa27.16■■□□□ 1.94
RBFOX1-219ENST00000569895 HTATIP2Q9BUP3 242 aa27.16■■□□□ 1.94
RBFOX1-219ENST00000569895 TXNRD2Q9NNW7 524 aa27.16■■□□□ 1.94
RBFOX1-219ENST00000569895 CATSPERGQ6ZRH7 1159 aa27.15■■□□□ 1.94
RBFOX1-219ENST00000569895 ACER1Q8TDN7 264 aa27.15■■□□□ 1.94
RBFOX1-219ENST00000569895 SOCS4Q8WXH5 440 aa27.15■■□□□ 1.94
RBFOX1-219ENST00000569895 PAGR1Q9BTK6 254 aa27.15■■□□□ 1.94
RBFOX1-219ENST00000569895 RABGAP1Q9Y3P9 1069 aa27.15■■□□□ 1.94
RBFOX1-219ENST00000569895 BRCA2P51587 3418 aa27.15■■□□□ 1.94
RBFOX1-219ENST00000569895 MKI67P46013 3256 aaKnown RBP27.15■■□□□ 1.94
RBFOX1-219ENST00000569895 CCNA1P78396 465 aa27.14■■□□□ 1.94
RBFOX1-219ENST00000569895 SEPT2Q15019 361 aa27.14■■□□□ 1.94
RBFOX1-219ENST00000569895 DPF3Q92784 378 aa27.14■■□□□ 1.94
RBFOX1-219ENST00000569895 DEFB118Q96PH6 123 aa27.14■■□□□ 1.94
RBFOX1-219ENST00000569895 CWC22Q9HCG8 908 aaKnown RBP27.14■■□□□ 1.94
RBFOX1-219ENST00000569895 PRKAB2O43741 272 aa27.13■■□□□ 1.93
RBFOX1-219ENST00000569895 VCAM1P19320 739 aa27.13■■□□□ 1.93
RBFOX1-219ENST00000569895 Q3C1V9 767 aa27.13■■□□□ 1.93
RBFOX1-219ENST00000569895 TMEM179Q6ZVK1 233 aa27.13■■□□□ 1.93
RBFOX1-219ENST00000569895 TRMT44Q8IYL2 757 aaKnown RBP27.13■■□□□ 1.93
RBFOX1-219ENST00000569895 PAK6Q9NQU5 681 aaPredicted RBP27.13■■□□□ 1.93
RBFOX1-219ENST00000569895 FARP2O94887 1054 aaPredicted RBP27.12■■□□□ 1.93
RBFOX1-219ENST00000569895 XRCC5P13010 732 aaKnown RBP27.12■■□□□ 1.93
RBFOX1-219ENST00000569895 GUCY1A2P33402 732 aa27.12■■□□□ 1.93
RBFOX1-219ENST00000569895 SLFNL1Q499Z3 407 aa27.12■■□□□ 1.93
RBFOX1-219ENST00000569895 GLRX3O76003 335 aaKnown RBP27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 CYP2D6P10635 497 aa27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 CYP2B6P20813 491 aa27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 UBE2Q1Q7Z7E8 422 aa27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 CCDC17Q96LX7 622 aa27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 HMX1Q9NP08 348 aaPredicted RBP27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 SLC4A4Q9Y6R1 1079 aa27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 RPTORQ8N122 1335 aa27.11■■□□□ 1.93
RBFOX1-219ENST00000569895 PEX10O60683 326 aa27.1■■□□□ 1.93
RBFOX1-219ENST00000569895 C12orf60Q5U649 245 aa27.1■■□□□ 1.93
RBFOX1-219ENST00000569895 GPR142Q7Z601 462 aa27.1■■□□□ 1.93
RBFOX1-219ENST00000569895 PLEKHH3Q7Z736 793 aa27.1■■□□□ 1.93
RBFOX1-219ENST00000569895 DYNLL2Q96FJ2 89 aa27.1■■□□□ 1.93
RBFOX1-219ENST00000569895 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.1■■□□□ 1.93
RBFOX1-219ENST00000569895 RPAP3Q9H6T3 665 aaPredicted RBP27.1■■□□□ 1.93
RBFOX1-219ENST00000569895 USP17L12C9JPN9 530 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 USP17L21D6R901 530 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 RGS2P41220 211 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 LBX2Q6XYB7 198 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 SLC44A5Q8NCS7 719 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 SH2D4AQ9H788 454 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 ARHGEF10LQ9HCE6 1279 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 HOXC10Q9NYD6 342 aa27.09■■□□□ 1.93
RBFOX1-219ENST00000569895 EVX2Q03828 476 aa27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 LRRFIP1Q32MZ4 808 aaKnown RBP27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 HABP4Q5JVS0 413 aaKnown RBP27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 KBTBD3Q8NAB2 608 aa27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 CRISPLD2Q9H0B8 497 aa27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 PUS7LQ9H0K6 701 aaKnown RBP27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 PORCNQ9H237 461 aa27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 NAV1Q8NEY1 1877 aa27.08■■□□□ 1.93
RBFOX1-219ENST00000569895 CDK8P49336 464 aa27.07■■□□□ 1.92
RBFOX1-219ENST00000569895 COG2Q14746 738 aa27.07■■□□□ 1.92
RBFOX1-219ENST00000569895 NR2E3Q9Y5X4 410 aa27.07■■□□□ 1.92
RBFOX1-219ENST00000569895 DDX60LQ5H9U9 1706 aaKnown RBP27.07■■□□□ 1.92
RBFOX1-219ENST00000569895 A0A1W2PRG0 241 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 H0YGN5 161 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 ZFYP08048 801 aaPredicted RBP27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 ZKSCAN1P17029 563 aaPredicted RBP27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 MORN1Q5T089 497 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 POTEEQ6S8J3 1075 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 C16orf86Q6ZW13 317 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 TRIB2Q92519 343 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 LPAR1Q92633 364 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 DOCK3Q8IZD9 2030 aa27.06■■□□□ 1.92
RBFOX1-219ENST00000569895 CNMDO75829 334 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 CHGBP05060 677 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 ICA1Q05084 483 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 WDR78Q5VTH9 848 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 CTR9Q6PD62 1173 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 ANKLE1Q8NAG6 615 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 USP6NLQ92738 828 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 TANGO6Q9C0B7 1094 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 ARPP21Q9UBL0 812 aaPredicted RBP27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 IVNS1ABPQ9Y6Y0 642 aa27.05■■□□□ 1.92
RBFOX1-219ENST00000569895 SPDYE16A6NNV3 312 aaPredicted RBP27.04■■□□□ 1.92
RBFOX1-219ENST00000569895 ERC2O15083 957 aa27.04■■□□□ 1.92
RBFOX1-219ENST00000569895 AKR1B1P15121 316 aa27.04■■□□□ 1.92
RBFOX1-219ENST00000569895 GIMAP6Q6P9H5 292 aa27.04■■□□□ 1.92
RBFOX1-219ENST00000569895 APPBP2Q92624 585 aa27.04■■□□□ 1.92
RBFOX1-219ENST00000569895 STRBPQ96SI9 672 aaKnown RBP27.04■■□□□ 1.92
RBFOX1-219ENST00000569895 APBA2Q99767 749 aa27.04■■□□□ 1.92
RBFOX1-219ENST00000569895 TMX2Q9Y320 296 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms