RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 FOXP4Q8IVH2 680 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-220ENST00000569827 ACER1Q8TDN7 264 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 SSH3Q8TE77 659 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 USP6NLQ92738 828 aa14.76□□□□□ -0.05
CAPN3-220ENST00000569827 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-220ENST00000569827 CWC22Q9HCG8 908 aaKnown RBP14.76□□□□□ -0.05
CAPN3-220ENST00000569827 RLBP1P12271 317 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 MAPK4P31152 587 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 USP5P45974 858 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 ATP8B2P98198 1209 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 ZKSCAN2Q63HK3 967 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L2Q6R6M4 530 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 PLEKHH3Q7Z736 793 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 DEFB123Q8N688 67 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 UBE2OQ9C0C9 1292 aaKnown RBP14.75□□□□□ -0.05
CAPN3-220ENST00000569827 BCL11AQ9H165 835 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 GPR108Q9NPR9 543 aa14.75□□□□□ -0.05
CAPN3-220ENST00000569827 PRUNE2Q8WUY3 3088 aa14.74□□□□□ -0.05
CAPN3-220ENST00000569827 BMP8BP34820 402 aa14.74□□□□□ -0.05
CAPN3-220ENST00000569827 RGS2P41220 211 aa14.74□□□□□ -0.05
CAPN3-220ENST00000569827 LHX8Q68G74 356 aa14.74□□□□□ -0.05
CAPN3-220ENST00000569827 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
CAPN3-220ENST00000569827 APBA2Q99767 749 aa14.74□□□□□ -0.05
CAPN3-220ENST00000569827 CDH23Q9H251 3354 aa14.74□□□□□ -0.05
CAPN3-220ENST00000569827 COL6A1P12109 1028 aa14.73□□□□□ -0.05
CAPN3-220ENST00000569827 XRCC5P13010 732 aaKnown RBP14.73□□□□□ -0.05
CAPN3-220ENST00000569827 VCAM1P19320 739 aa14.73□□□□□ -0.05
CAPN3-220ENST00000569827 TDHQ8IZJ6 230 aa14.73□□□□□ -0.05
CAPN3-220ENST00000569827 BTBD7Q9P203 1132 aa14.73□□□□□ -0.05
CAPN3-220ENST00000569827 EXOC6BQ9Y2D4 811 aa14.73□□□□□ -0.05
CAPN3-220ENST00000569827 ZNF236Q9UL36 1845 aa14.73□□□□□ -0.05
CAPN3-220ENST00000569827 CAPN2P17655 700 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 CNGA1P29973 690 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 CYP2C19P33261 490 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 PLCD1P51178 756 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 ATN1P54259 1190 aaPredicted RBP14.72□□□□□ -0.05
CAPN3-220ENST00000569827 MAP2K5Q13163 448 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 ANO1Q5XXA6 986 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 CLEC10AQ8IUN9 316 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
CAPN3-220ENST00000569827 NPLOC4Q8TAT6 608 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 ZNF512BQ96KM6 892 aaPredicted RBP14.72□□□□□ -0.05
CAPN3-220ENST00000569827 SERPINB13Q9UIV8 391 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 MCM3APO60318 1980 aa14.72□□□□□ -0.05
CAPN3-220ENST00000569827 VCANP13611 3396 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L15C9J2P7 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L13C9JLJ4 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L11C9JVI0 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L18D6R9N7 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L22D6RA61 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L17D6RBQ6 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L19D6RCP7 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L20D6RJB6 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 CCER2I3L3R5 266 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 GUCY1A2P33402 732 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 SHMT1P34896 483 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 USP17L24Q0WX57 530 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 ABCB5Q2M3G0 1257 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 CERKLQ49MI3 558 aaPredicted RBP14.71□□□□□ -0.05
CAPN3-220ENST00000569827 TATDN1Q6P1N9 297 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 CATSPERGQ6ZRH7 1159 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 AACSQ86V21 672 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 TRPV1Q8NER1 839 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 SENP6Q9GZR1 1112 aaPredicted RBP14.71□□□□□ -0.05
CAPN3-220ENST00000569827 RPAP3Q9H6T3 665 aaPredicted RBP14.71□□□□□ -0.05
CAPN3-220ENST00000569827 IL1RAPL2Q9NP60 686 aa14.71□□□□□ -0.05
CAPN3-220ENST00000569827 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-220ENST00000569827 APBB1O00213 710 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 PTPREP23469 700 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 SEPT2Q15019 361 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 SLFNL1Q499Z3 407 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 SLC44A5Q8NCS7 719 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
CAPN3-220ENST00000569827 C12orf42Q96LP6 360 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 GINM1Q9NU53 330 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 NOP58Q9Y2X3 529 aaKnown RBP14.7□□□□□ -0.06
CAPN3-220ENST00000569827 RABGAP1Q9Y3P9 1069 aa14.7□□□□□ -0.06
CAPN3-220ENST00000569827 MYH4Q9Y623 1939 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 MYO9BQ13459 2157 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 SMIM22K7EJ46 135 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 MPHOSPH10O00566 681 aaKnown RBP14.69□□□□□ -0.06
CAPN3-220ENST00000569827 CYP2D6P10635 497 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 LRIT3Q3SXY7 679 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 KIAA1755Q5JYT7 1200 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 CEP85Q6P2H3 762 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-220ENST00000569827 TRMT44Q8IYL2 757 aaKnown RBP14.69□□□□□ -0.06
CAPN3-220ENST00000569827 SDR42E1Q8WUS8 393 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 FAM161BQ96MY7 647 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 RIOK1Q9BRS2 568 aaKnown RBP14.69□□□□□ -0.06
CAPN3-220ENST00000569827 KIAA1683Q9H0B3 1180 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 EHD4Q9H223 541 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 MTMR10Q9NXD2 777 aa14.69□□□□□ -0.06
CAPN3-220ENST00000569827 A0A1W2PRG0 241 aa14.68□□□□□ -0.06
CAPN3-220ENST00000569827 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
CAPN3-220ENST00000569827 POLR3DP05423 398 aaPredicted RBP14.68□□□□□ -0.06
CAPN3-220ENST00000569827 CCNA1P78396 465 aa14.68□□□□□ -0.06
CAPN3-220ENST00000569827 MAP3K12Q12852 859 aa14.68□□□□□ -0.06
CAPN3-220ENST00000569827 GJC2Q5T442 439 aaPredicted RBP14.68□□□□□ -0.06
CAPN3-220ENST00000569827 MFSD14CQ5VZR4 134 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms