RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 BEGAINQ9BUH8 593 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 RNF26Q9BY78 433 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 FOXP1Q9H334 677 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 CDHR5Q9HBB8 845 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 CD209Q9NNX6 404 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 NPDC1Q9NQX5 325 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 TCP11L1Q9NUJ3 509 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 RBM28Q9NW13 759 aaKnown RBP6.23□□□□□ -1.41
SF3B3-213ENST00000569687 ANKIB1Q9P2G1 1089 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 USP25Q9UHP3 1055 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 CLIC4Q9Y696 253 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 FAM205AQ6ZU69 1335 aa6.23□□□□□ -1.41
SF3B3-213ENST00000569687 CACNA1SQ13698 1873 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 MYO5AQ9Y4I1 1855 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 GPR75-ASB3A0A0A6YYF3 556 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 G3V3G9 751 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 POLRMTO00411 1230 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 KINO60870 393 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 DDAH1O94760 285 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 ADCY5O95622 1261 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 BAG3O95817 575 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 MMP1P03956 469 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 POLR3DP05423 398 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 LDHBP07195 334 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 BAG6P46379 1132 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 GPSM2P81274 684 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 CEBPZQ03701 1054 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 EN1Q05925 392 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 PDE4BQ07343 736 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 SAFBQ15424 915 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 SF3A1Q15459 793 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 CAMK4Q16566 473 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 RRP12Q5JTH9 1297 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 TMEM92Q6UXU6 159 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 CATIPQ7Z7H3 387 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 MICU3Q86XE3 530 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 IQCA1Q86XH1 822 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 DGKHQ86XP1 1220 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 COL23A1Q86Y22 540 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 RAB11FIP4Q86YS3 637 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 FAM177A1Q8N128 213 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 CCDC24Q8N4L8 307 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 ENAHQ8N8S7 591 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 JMYQ8N9B5 988 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 FSIP1Q8NA03 581 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 RPGRQ92834 1020 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 PHKBQ93100 1093 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 SLC26A6Q9BXS9 759 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 GOLPH3LQ9H4A5 285 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 ANO8Q9HCE9 1232 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 GJB4Q9NTQ9 266 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 ARPP21Q9UBL0 812 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-213ENST00000569687 GGA1Q9UJY5 639 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 HPSEQ9Y251 543 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 ZKSCAN5Q9Y2L8 839 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 SUGT1Q9Y2Z0 365 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 TNKSO95271 1327 aa6.22□□□□□ -1.41
SF3B3-213ENST00000569687 TNRC6CQ9HCJ0 1690 aaKnown RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 NPHP1O15259 732 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 CUTAO60888 179 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 PPFIA3O75145 1194 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 OFD1O75665 1012 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 WDHD1O75717 1129 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 PLCG2P16885 1265 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 RXRAP19793 462 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 PRDX5P30044 214 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 GUCY1A2P33402 732 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 ZNF165P49910 485 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 TOB1P50616 345 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 NDUFA8P51970 172 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 FOSBP53539 338 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 IRX5P78411 483 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 DDR1Q08345 913 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 CHAF1AQ13111 956 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 IQCB1Q15051 598 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 SLC15A2Q16348 729 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 PKN1Q16512 942 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 ANO6Q4KMQ2 910 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 RILPL1Q5EBL4 403 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 IFIT1BQ5T764 474 aaKnown RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 SARM1Q6SZW1 724 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 DZIP1Q86YF9 867 aaKnown RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 SLF2Q8IX21 1173 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 CKAP2LQ8IYA6 745 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 TBC1D16Q8TBP0 767 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 TBC1D22AQ8WUA7 517 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 AIFM3Q96NN9 605 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 BPIFA3Q9BQP9 254 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 ZKSCAN3Q9BRR0 538 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 NOL10Q9BSC4 688 aaKnown RBP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 MYL10Q9BUA6 226 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 FTOQ9C0B1 505 aaKnown RBP eCLIP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 OCEL1Q9H607 264 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 CBX8Q9HC52 389 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 PLSCR2Q9NRY7 297 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 TOMM22Q9NS69 142 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 ANO10Q9NW15 660 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms