RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 SHROOM1Q2M3G4 852 aaPredicted RBP10.76□□□□□ -0.69
CHD9-219ENST00000569225 FAM47AQ5JRC9 791 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 OTUD7BQ6GQQ9 843 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 FASTKD5Q7L8L6 764 aaKnown RBP10.76□□□□□ -0.69
CHD9-219ENST00000569225 DNAJC5GQ8N7S2 189 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 NCOA7Q8NI08 942 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 TMOD4Q9NZQ9 345 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.76□□□□□ -0.69
CHD9-219ENST00000569225 NEDD4P46934 1319 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 BAZ2AQ9UIF9 1905 aaKnown RBP10.76□□□□□ -0.69
CHD9-219ENST00000569225 CCL15-CCL14A0A0B4J2E2 113 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 A0A0G2JLL6 359 aaPredicted RBP10.76□□□□□ -0.69
CHD9-219ENST00000569225 E7EWF7 191 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 GUCY1A2P33402 732 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 BACE1P56817 501 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 ATP2B2Q01814 1243 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 CCL15Q16663 113 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 PRRT2Q7Z6L0 340 aaPredicted RBP10.76□□□□□ -0.69
CHD9-219ENST00000569225 CCDC84Q86UT8 332 aaPredicted RBP10.76□□□□□ -0.69
CHD9-219ENST00000569225 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 KIAA1683Q9H0B3 1180 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 INCENPQ9NQS7 918 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 SYNPO2Q9UMS6 1093 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 LAMB1P07942 1786 aa10.76□□□□□ -0.69
CHD9-219ENST00000569225 B4E1Z4 1266 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 KDM4AO75164 1064 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 TTLL1O95922 423 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 HSPA4P34932 840 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 MAP2K1Q02750 393 aaPredicted RBP10.75□□□□□ -0.69
CHD9-219ENST00000569225 MTMR2Q13614 643 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 UBAC1Q9BSL1 405 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
CHD9-219ENST00000569225 TCP11L1Q9NUJ3 509 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 MTMR4Q9NYA4 1195 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 NYAP2Q9P242 653 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 OTOFQ9HC10 1997 aa10.75□□□□□ -0.69
CHD9-219ENST00000569225 IGKV6D-41A0A0C4DH26 115 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
CHD9-219ENST00000569225 ALDH1A1P00352 501 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 EEF2P13639 858 aaKnown RBP10.74□□□□□ -0.69
CHD9-219ENST00000569225 TM4SF4P48230 202 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 PABPC4Q13310 644 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHD9-219ENST00000569225 SART3Q15020 963 aaKnown RBP10.74□□□□□ -0.69
CHD9-219ENST00000569225 TSGA10IPQ3SY00 556 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 C8orf34Q49A92 452 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 SH3D19Q5HYK7 790 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 GADL1Q6ZQY3 521 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 PROCA1Q8NCQ7 364 aaPredicted RBP10.74□□□□□ -0.69
CHD9-219ENST00000569225 CEP95Q96GE4 821 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 BEGAINQ9BUH8 593 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 USP26Q9BXU7 913 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 STX8Q9UNK0 236 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 TACC3Q9Y6A5 838 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 DOCK1Q14185 1865 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 HMGB1P09429 215 aaKnown RBP10.74□□□□□ -0.69
CHD9-219ENST00000569225 HMGCS2P54868 508 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 ACER1Q8TDN7 264 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 BRI3BPQ8WY22 251 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 LPAR1Q92633 364 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 TTC14Q96N46 770 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 UPF2Q9HAU5 1272 aaKnown RBP10.74□□□□□ -0.69
CHD9-219ENST00000569225 ZCCHC17Q9NP64 241 aaKnown RBP10.74□□□□□ -0.69
CHD9-219ENST00000569225 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 TMX2Q9Y320 296 aa10.74□□□□□ -0.69
CHD9-219ENST00000569225 ERICH2A1L162 156 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 MCM5P33992 734 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 ANKRD23Q86SG2 305 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 DGKHQ86XP1 1220 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 IFNL1Q8IU54 200 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 CLEC10AQ8IUN9 316 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 KCNB2Q92953 911 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 MKL1Q969V6 931 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 C12orf42Q96LP6 360 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 ZSCAN10Q96SZ4 725 aaPredicted RBP10.73□□□□□ -0.69
CHD9-219ENST00000569225 ZIC5Q96T25 663 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 ZSWIM5Q9P217 1185 aa10.73□□□□□ -0.69
CHD9-219ENST00000569225 A0A1W2PRG0 241 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 CA12O43570 354 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 TOP1P11387 765 aaKnown RBP10.72□□□□□ -0.69
CHD9-219ENST00000569225 PSMA5P28066 241 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 ZYXQ15942 572 aaKnown RBP10.72□□□□□ -0.69
CHD9-219ENST00000569225 STOX1Q6ZVD7 989 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 SIAH1Q8IUQ4 282 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 NEK1Q96PY6 1258 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 MTA3Q9BTC8 594 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 VCPKMTQ9H867 229 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 IL17RBQ9NRM6 502 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 PNMA3Q9UL41 463 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 AGTPBP1Q9UPW5 1226 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 SLC45A1Q9Y2W3 748 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 TAF6LQ9Y6J9 622 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 LAMA4Q16363 1823 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 RAD21O60216 631 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 NMT2O60551 498 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 ANAPC15P60006 121 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 MB21D2Q8IYB1 491 aaPredicted RBP10.72□□□□□ -0.69
CHD9-219ENST00000569225 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms