RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 NEDD1Q8NHV4 660 aa24.2■■□□□ 1.46
SPNS1-212ENST00000568900 MYSM1Q5VVJ2 828 aa24.19■■□□□ 1.46
SPNS1-212ENST00000568900 PGBD1Q96JS3 809 aa24.19■■□□□ 1.46
SPNS1-212ENST00000568900 RCOR1Q9UKL0 485 aa24.19■■□□□ 1.46
SPNS1-212ENST00000568900 RAD17O75943 681 aa24.19■■□□□ 1.46
SPNS1-212ENST00000568900 GABPAQ06546 454 aa24.19■■□□□ 1.46
SPNS1-212ENST00000568900 KLHL34Q8N239 644 aa24.19■■□□□ 1.46
SPNS1-212ENST00000568900 hCG_1642624A0A1W2PR95 340 aa24.18■■□□□ 1.46
SPNS1-212ENST00000568900 DALRD3Q5D0E6 543 aaKnown RBP24.18■■□□□ 1.46
SPNS1-212ENST00000568900 CCDC183Q5T5S1 534 aa24.18■■□□□ 1.46
SPNS1-212ENST00000568900 SERPINB13Q9UIV8 391 aa24.18■■□□□ 1.46
SPNS1-212ENST00000568900 KCNJ14Q9UNX9 436 aa24.18■■□□□ 1.46
SPNS1-212ENST00000568900 V9GY48 417 aaPredicted RBP24.18■■□□□ 1.46
SPNS1-212ENST00000568900 PRPF3O43395 683 aaKnown RBP24.18■■□□□ 1.46
SPNS1-212ENST00000568900 ZFPM1Q8IX07 1006 aa24.18■■□□□ 1.46
SPNS1-212ENST00000568900 SRBD1Q8N5C6 995 aaKnown RBP24.18■■□□□ 1.46
SPNS1-212ENST00000568900 TMEM47Q9BQJ4 181 aa24.18■■□□□ 1.46
SPNS1-212ENST00000568900 BAZ2BQ9UIF8 2168 aaKnown RBP24.17■■□□□ 1.46
SPNS1-212ENST00000568900 BRCA1P38398 1863 aaKnown RBP24.17■■□□□ 1.46
SPNS1-212ENST00000568900 KIF5BP33176 963 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 TCP10Q12799 353 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 GRPEL1Q9HAV7 217 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 CNTNAP5Q8WYK1 1306 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 MMP1P03956 469 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 HLA-DOAP06340 250 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 CFAP100Q494V2 611 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 RSBN1LQ6PCB5 846 aaPredicted RBP24.17■■□□□ 1.46
SPNS1-212ENST00000568900 MTMR7Q9Y216 660 aa24.17■■□□□ 1.46
SPNS1-212ENST00000568900 PSMD14O00487 310 aa24.16■■□□□ 1.46
SPNS1-212ENST00000568900 LIG1P18858 919 aa24.16■■□□□ 1.46
SPNS1-212ENST00000568900 SAFBQ15424 915 aaKnown RBP eCLIP24.16■■□□□ 1.46
SPNS1-212ENST00000568900 PKN1Q16512 942 aa24.16■■□□□ 1.46
SPNS1-212ENST00000568900 BICD2Q8TD16 824 aa24.16■■□□□ 1.46
SPNS1-212ENST00000568900 RTEL1Q9NZ71 1219 aa24.16■■□□□ 1.46
SPNS1-212ENST00000568900 CLIC4Q9Y696 253 aa24.16■■□□□ 1.46
SPNS1-212ENST00000568900 U2AF2P26368 475 aaKnown RBP eCLIP24.15■■□□□ 1.46
SPNS1-212ENST00000568900 MRE11P49959 708 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 CEP95Q96GE4 821 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.15■■□□□ 1.46
SPNS1-212ENST00000568900 MYO3BQ8WXR4 1341 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 PSDA5PKW4 1024 aaPredicted RBP24.15■■□□□ 1.46
SPNS1-212ENST00000568900 LRSAM1Q6UWE0 723 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 NIM1KQ8IY84 436 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 IDI2Q9BXS1 227 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 VPS33BQ9H267 617 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 TDRD3Q9H7E2 651 aaKnown RBP24.15■■□□□ 1.46
SPNS1-212ENST00000568900 FAM198AQ9UFP1 575 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 SWAP70Q9UH65 585 aa24.15■■□□□ 1.46
SPNS1-212ENST00000568900 DIS3L2Q8IYB7 885 aaKnown RBP24.14■■□□□ 1.46
SPNS1-212ENST00000568900 MAP3K14Q99558 947 aa24.14■■□□□ 1.46
SPNS1-212ENST00000568900 VPS54Q9P1Q0 977 aa24.14■■□□□ 1.46
SPNS1-212ENST00000568900 VIL1P09327 827 aaKnown RBP24.14■■□□□ 1.45
SPNS1-212ENST00000568900 XRCC6P12956 609 aaKnown RBP eCLIP24.14■■□□□ 1.45
SPNS1-212ENST00000568900 AKR1B1P15121 316 aa24.14■■□□□ 1.45
SPNS1-212ENST00000568900 GRM4Q14833 912 aa24.14■■□□□ 1.45
SPNS1-212ENST00000568900 UPF1Q92900 1129 aaKnown RBP eCLIP24.14■■□□□ 1.45
SPNS1-212ENST00000568900 BTBD18B2RXH4 712 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 XBP1P17861 261 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 ME1P48163 572 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 STK38Q15208 465 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 STAG2Q8N3U4 1231 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 PIBF1Q8WXW3 757 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 POLR3EQ9NVU0 708 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 ZNRF3Q9ULT6 936 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 FER1L6Q2WGJ9 1857 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 SHMT1P34896 483 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 ZSCAN29Q8IWY8 852 aaPredicted RBP24.13■■□□□ 1.45
SPNS1-212ENST00000568900 SHISA4Q96DD7 197 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 PRMT6Q96LA8 375 aaPredicted RBP24.13■■□□□ 1.45
SPNS1-212ENST00000568900 MAD2L2Q9UI95 211 aa24.13■■□□□ 1.45
SPNS1-212ENST00000568900 ZBTB12Q9Y330 459 aaPredicted RBP24.13■■□□□ 1.45
SPNS1-212ENST00000568900 PLIN4Q96Q06 1357 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 SLURP2P0DP57 97 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 LINC00301Q8NCQ3 95 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 SGIP1Q9BQI5 828 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 SIPA1L1O43166 1804 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 DDTLA6NHG4 134 aaPredicted RBP24.12■■□□□ 1.45
SPNS1-212ENST00000568900 ANO1Q5XXA6 986 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 NOSTRINQ8IVI9 506 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 EHD4Q9H223 541 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 TAOK3Q9H2K8 898 aa24.12■■□□□ 1.45
SPNS1-212ENST00000568900 DHX36Q9H2U1 1008 aaKnown RBP24.12■■□□□ 1.45
SPNS1-212ENST00000568900 YEATS4O95619 227 aa24.11■■□□□ 1.45
SPNS1-212ENST00000568900 TOP1P11387 765 aaKnown RBP24.11■■□□□ 1.45
SPNS1-212ENST00000568900 NASPP49321 788 aaPredicted RBP24.11■■□□□ 1.45
SPNS1-212ENST00000568900 SF3A1Q15459 793 aaKnown RBP24.11■■□□□ 1.45
SPNS1-212ENST00000568900 GMLQ99445 158 aa24.11■■□□□ 1.45
SPNS1-212ENST00000568900 RASGRP2Q7LDG7 609 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 FOXP1Q9H334 677 aaPredicted RBP24.1■■□□□ 1.45
SPNS1-212ENST00000568900 DACT1Q9NYF0 836 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 GNAQP50148 359 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 NR5A1Q13285 461 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 SH3BP5LQ7L8J4 393 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 MTMR4Q9NYA4 1195 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 HDAC9Q9UKV0 1011 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 CD2APQ9Y5K6 639 aa24.1■■□□□ 1.45
SPNS1-212ENST00000568900 NPM3O75607 178 aaKnown RBP24.09■■□□□ 1.45
SPNS1-212ENST00000568900 NOVP48745 357 aa24.09■■□□□ 1.45
SPNS1-212ENST00000568900 KCNG4Q8TDN1 519 aa24.09■■□□□ 1.45
SPNS1-212ENST00000568900 OXER1Q8TDS5 423 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms