RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.51
USB1-214ENST00000568848 XRCC5P13010 732 aaKnown RBP18.21■□□□□ 0.51
USB1-214ENST00000568848 CNGA1P29973 690 aa18.21■□□□□ 0.51
USB1-214ENST00000568848 MAPK4P31152 587 aa18.21■□□□□ 0.51
USB1-214ENST00000568848 RAB3GAP1Q15042 981 aa18.21■□□□□ 0.51
USB1-214ENST00000568848 USP17L2Q6R6M4 530 aa18.21■□□□□ 0.51
USB1-214ENST00000568848 C19orf81C9J6K1 198 aa18.2■□□□□ 0.5
USB1-214ENST00000568848 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
USB1-214ENST00000568848 MAP2K5Q13163 448 aa18.2■□□□□ 0.5
USB1-214ENST00000568848 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
USB1-214ENST00000568848 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
USB1-214ENST00000568848 PRUNE2Q8WUY3 3088 aa18.2■□□□□ 0.5
USB1-214ENST00000568848 SPTBN5Q9NRC6 3674 aaKnown RBP18.19■□□□□ 0.5
USB1-214ENST00000568848 CT47B1P0C2W7 299 aaPredicted RBP18.19■□□□□ 0.5
USB1-214ENST00000568848 VCAM1P19320 739 aa18.19■□□□□ 0.5
USB1-214ENST00000568848 POLA2Q14181 598 aa18.19■□□□□ 0.5
USB1-214ENST00000568848 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
USB1-214ENST00000568848 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
USB1-214ENST00000568848 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
USB1-214ENST00000568848 LTBP2Q14767 1821 aa18.19■□□□□ 0.5
USB1-214ENST00000568848 SURF6O75683 361 aaKnown RBP18.18■□□□□ 0.5
USB1-214ENST00000568848 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
USB1-214ENST00000568848 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
USB1-214ENST00000568848 CAPN2P17655 700 aa18.18■□□□□ 0.5
USB1-214ENST00000568848 GUCY1A2P33402 732 aa18.18■□□□□ 0.5
USB1-214ENST00000568848 USP5P45974 858 aa18.18■□□□□ 0.5
USB1-214ENST00000568848 PLCD1P51178 756 aa18.18■□□□□ 0.5
USB1-214ENST00000568848 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
USB1-214ENST00000568848 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
USB1-214ENST00000568848 ARHGAP45Q92619 1136 aa18.18■□□□□ 0.5
USB1-214ENST00000568848 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
USB1-214ENST00000568848 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
USB1-214ENST00000568848 PLCG2P16885 1265 aa18.17■□□□□ 0.5
USB1-214ENST00000568848 PTPREP23469 700 aa18.17■□□□□ 0.5
USB1-214ENST00000568848 KIAA1755Q5JYT7 1200 aa18.17■□□□□ 0.5
USB1-214ENST00000568848 PRAMEF19Q5SWL8 479 aa18.17■□□□□ 0.5
USB1-214ENST00000568848 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
USB1-214ENST00000568848 BCL11AQ9H165 835 aa18.17■□□□□ 0.5
USB1-214ENST00000568848 RPAP3Q9H6T3 665 aaPredicted RBP18.17■□□□□ 0.5
USB1-214ENST00000568848 DDX20Q9UHI6 824 aaKnown RBP18.17■□□□□ 0.5
USB1-214ENST00000568848 SPDYE16A6NNV3 312 aaPredicted RBP18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L15C9J2P7 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L13C9JLJ4 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L11C9JVI0 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L18D6R9N7 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L22D6RA61 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L17D6RBQ6 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L19D6RCP7 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L20D6RJB6 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 SMIM22K7EJ46 135 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 CYP2D6P10635 497 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 SHMT1P34896 483 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 RTP1P59025 263 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 USP17L24Q0WX57 530 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 GPR153Q6NV75 609 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 TATDN1Q6P1N9 297 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 ATP11BQ9Y2G3 1177 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 RABGAP1Q9Y3P9 1069 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 NAV1Q8NEY1 1877 aa18.16■□□□□ 0.5
USB1-214ENST00000568848 A0A1W2PRG0 241 aa18.15■□□□□ 0.5
USB1-214ENST00000568848 SEPT2Q15019 361 aa18.15■□□□□ 0.5
USB1-214ENST00000568848 ABCB5Q2M3G0 1257 aa18.15■□□□□ 0.5
USB1-214ENST00000568848 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
USB1-214ENST00000568848 SLC44A5Q8NCS7 719 aa18.15■□□□□ 0.5
USB1-214ENST00000568848 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
USB1-214ENST00000568848 C12orf42Q96LP6 360 aa18.15■□□□□ 0.5
USB1-214ENST00000568848 RLFQ13129 1914 aa18.14■□□□□ 0.49
USB1-214ENST00000568848 RLBP1P12271 317 aa18.14■□□□□ 0.49
USB1-214ENST00000568848 ATP8B2P98198 1209 aa18.14■□□□□ 0.49
USB1-214ENST00000568848 ATP2B2Q01814 1243 aa18.14■□□□□ 0.49
USB1-214ENST00000568848 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.49
USB1-214ENST00000568848 MFSD14CQ5VZR4 134 aa18.14■□□□□ 0.49
USB1-214ENST00000568848 SH3RF1Q7Z6J0 888 aa18.14■□□□□ 0.49
USB1-214ENST00000568848 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.14■□□□□ 0.49
USB1-214ENST00000568848 PRDM5Q9NQX1 630 aaPredicted RBP18.14■□□□□ 0.49
USB1-214ENST00000568848 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
USB1-214ENST00000568848 SLC15A5A6NIM6 579 aa18.13■□□□□ 0.49
USB1-214ENST00000568848 POTEB2H3BUK9 544 aa18.13■□□□□ 0.49
USB1-214ENST00000568848 GRB14Q14449 540 aa18.13■□□□□ 0.49
USB1-214ENST00000568848 SHHQ15465 462 aa18.13■□□□□ 0.49
USB1-214ENST00000568848 TRMT44Q8IYL2 757 aaKnown RBP18.13■□□□□ 0.49
USB1-214ENST00000568848 FERMT2Q96AC1 680 aa18.13■□□□□ 0.49
USB1-214ENST00000568848 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
USB1-214ENST00000568848 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
USB1-214ENST00000568848 GPR108Q9NPR9 543 aa18.13■□□□□ 0.49
USB1-214ENST00000568848 COBLO75128 1261 aa18.12■□□□□ 0.49
USB1-214ENST00000568848 CYBAP13498 195 aa18.12■□□□□ 0.49
USB1-214ENST00000568848 TRIM60Q495X7 471 aa18.12■□□□□ 0.49
USB1-214ENST00000568848 KIAA1683Q9H0B3 1180 aa18.12■□□□□ 0.49
USB1-214ENST00000568848 EXOC6BQ9Y2D4 811 aa18.12■□□□□ 0.49
USB1-214ENST00000568848 MPHOSPH10O00566 681 aaKnown RBP18.11■□□□□ 0.49
USB1-214ENST00000568848 CHGBP05060 677 aa18.11■□□□□ 0.49
USB1-214ENST00000568848 ADORA2AP29274 412 aa18.11■□□□□ 0.49
USB1-214ENST00000568848 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
USB1-214ENST00000568848 LPAR1Q92633 364 aa18.11■□□□□ 0.49
USB1-214ENST00000568848 LENG1Q96BZ8 264 aaPredicted RBP18.11■□□□□ 0.49
USB1-214ENST00000568848 RIOK1Q9BRS2 568 aaKnown RBP18.11■□□□□ 0.49
USB1-214ENST00000568848 A0A0G2JMZ2 1700 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms