RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 MAPK4P31152 587 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 CAP1Q01518 475 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 GPRC5AQ8NFJ5 357 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
CDH3-206ENST00000567674 ARHGAP39Q9C0H5 1083 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 EMILIN3Q9NT22 766 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 STAP2Q9UGK3 403 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 RABGAP1Q9Y3P9 1069 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 COL6A3P12111 3177 aa13.44□□□□□ -0.26
CDH3-206ENST00000567674 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
CDH3-206ENST00000567674 SLURP2P0DP57 97 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 HERVK_113P62684 666 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 CCNA1P78396 465 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 DDX60LQ5H9U9 1706 aaKnown RBP13.43□□□□□ -0.26
CDH3-206ENST00000567674 CATSPERGQ6ZRH7 1159 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 C16orf86Q6ZW13 317 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 ANKRD13CQ8N6S4 541 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 SOCS4Q8WXH5 440 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
CDH3-206ENST00000567674 SLC4A4Q9Y6R1 1079 aa13.43□□□□□ -0.26
CDH3-206ENST00000567674 PATL2C9JE40 543 aaKnown RBP13.42□□□□□ -0.26
CDH3-206ENST00000567674 GDF11O95390 407 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 GJB1P08034 283 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 MX1P20591 662 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 CTGFP29279 349 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 JAG1P78504 1218 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 SLC4A8Q2Y0W8 1093 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 MB21D1Q8N884 522 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 PI4K2BQ8TCG2 481 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 SDR42E1Q8WUS8 393 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 EDC3Q96F86 508 aaKnown RBP13.42□□□□□ -0.26
CDH3-206ENST00000567674 FEZ1Q99689 392 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 PUS7LQ9H0K6 701 aaKnown RBP13.42□□□□□ -0.26
CDH3-206ENST00000567674 ARMT1Q9H993 441 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 KANSL2Q9H9L4 492 aa13.42□□□□□ -0.26
CDH3-206ENST00000567674 SALL3Q9BXA9 1300 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 USP17L21D6R901 530 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 GUCY1A2P33402 732 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 GJA8P48165 433 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 FLT3LGP49771 235 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 NT5C2P49902 561 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 PRKCZQ05513 592 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
CDH3-206ENST00000567674 ARHGEF10LQ9HCE6 1279 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 GJD2Q9UKL4 321 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 TMX2Q9Y320 296 aa13.41□□□□□ -0.26
CDH3-206ENST00000567674 STRNO43815 780 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 ADCY3O60266 1144 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 CDK8P49336 464 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 COG2Q14746 738 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
CDH3-206ENST00000567674 SMC5Q8IY18 1101 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 OSBP2Q969R2 916 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.4□□□□□ -0.26
CDH3-206ENST00000567674 RBPJLQ9UBG7 517 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 ROBO3Q96MS0 1386 aa13.4□□□□□ -0.26
CDH3-206ENST00000567674 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
CDH3-206ENST00000567674 MYH7P12883 1935 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 A0A1W2PPC1 479 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
CDH3-206ENST00000567674 VCAM1P19320 739 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 ERVK-9P63128 1117 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 ERVK-24P63145 666 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 SEPT2Q15019 361 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 CRBNQ96SW2 442 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 OSBPL3Q9H4L5 887 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 MGAMO43451 1857 aa13.39□□□□□ -0.27
CDH3-206ENST00000567674 TRIOBPQ9H2D6 2365 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 NAV1Q8NEY1 1877 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 GPAA1O43292 621 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 PRKAB2O43741 272 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 HMGCRP04035 888 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
CDH3-206ENST00000567674 ANKLE1Q8NAG6 615 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 SH3TC2Q8TF17 1288 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 DPF3Q92784 378 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 VCPKMTQ9H867 229 aa13.38□□□□□ -0.27
CDH3-206ENST00000567674 MPHOSPH10O00566 681 aaKnown RBP13.37□□□□□ -0.27
CDH3-206ENST00000567674 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
CDH3-206ENST00000567674 HOXC6P09630 235 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 PDE1AP54750 535 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 ICA1Q05084 483 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 USP6NLQ92738 828 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 MKL1Q969V6 931 aa13.37□□□□□ -0.27
CDH3-206ENST00000567674 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms