RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 RASA1P20936 1047 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 USP14P54578 494 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 TFAP4Q01664 338 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 ICA1Q05084 483 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 TAF1CQ15572 869 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-219ENST00000567399 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 IL25Q9H293 177 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 RNF41Q9H4P4 317 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-219ENST00000567399 SH2D4AQ9H788 454 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 KANSL2Q9H9L4 492 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 ZFYVE28Q9HCC9 887 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-219ENST00000567399 ATAD5Q96QE3 1844 aa17.97■□□□□ 0.47
COMMD4-219ENST00000567399 PDHXO00330 501 aa17.96■□□□□ 0.47
COMMD4-219ENST00000567399 RAD21O60216 631 aa17.96■□□□□ 0.47
COMMD4-219ENST00000567399 PABPC4Q13310 644 aaKnown RBP eCLIP17.96■□□□□ 0.47
COMMD4-219ENST00000567399 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
COMMD4-219ENST00000567399 ANKRD23Q86SG2 305 aa17.96■□□□□ 0.47
COMMD4-219ENST00000567399 FAM43AQ8N2R8 423 aa17.96■□□□□ 0.47
COMMD4-219ENST00000567399 ANO2Q9NQ90 1003 aa17.96■□□□□ 0.47
COMMD4-219ENST00000567399 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
COMMD4-219ENST00000567399 GUCY1A2P33402 732 aa17.95■□□□□ 0.46
COMMD4-219ENST00000567399 LBX1P52954 281 aa17.95■□□□□ 0.46
COMMD4-219ENST00000567399 PTH1RQ03431 593 aa17.95■□□□□ 0.46
COMMD4-219ENST00000567399 AKNAD1Q5T1N1 836 aa17.95■□□□□ 0.46
COMMD4-219ENST00000567399 PROCA1Q8NCQ7 364 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-219ENST00000567399 LAMB1P07942 1786 aa17.94■□□□□ 0.46
COMMD4-219ENST00000567399 PCP11498 1178 aaKnown RBP17.94■□□□□ 0.46
COMMD4-219ENST00000567399 EEF2P13639 858 aaKnown RBP17.94■□□□□ 0.46
COMMD4-219ENST00000567399 OSBPP22059 807 aa17.94■□□□□ 0.46
COMMD4-219ENST00000567399 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
COMMD4-219ENST00000567399 ACER1Q8TDN7 264 aa17.94■□□□□ 0.46
COMMD4-219ENST00000567399 ZCCHC17Q9NP64 241 aaKnown RBP17.94■□□□□ 0.46
COMMD4-219ENST00000567399 AGTPBP1Q9UPW5 1226 aa17.94■□□□□ 0.46
COMMD4-219ENST00000567399 HSPA8P11142 646 aaKnown RBP17.93■□□□□ 0.46
COMMD4-219ENST00000567399 CRHR2Q13324 411 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 DGKZQ13574 1117 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 CLEC10AQ8IUN9 316 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 STAG1Q8WVM7 1258 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 PARK7Q99497 189 aaKnown RBP17.93■□□□□ 0.46
COMMD4-219ENST00000567399 KIAA1683Q9H0B3 1180 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 CLIP2Q9UDT6 1046 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 PNMA3Q9UL41 463 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 MYH8P13535 1937 aa17.93■□□□□ 0.46
COMMD4-219ENST00000567399 ORC4O43929 436 aa17.92■□□□□ 0.46
COMMD4-219ENST00000567399 IRX3P78415 501 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-219ENST00000567399 TRDNQ13061 729 aa17.92■□□□□ 0.46
COMMD4-219ENST00000567399 TREML2Q5T2D2 321 aa17.92■□□□□ 0.46
COMMD4-219ENST00000567399 GPAT2Q6NUI2 795 aa17.92■□□□□ 0.46
COMMD4-219ENST00000567399 TBC1D10CQ8IV04 446 aa17.92■□□□□ 0.46
COMMD4-219ENST00000567399 NEDD1Q8NHV4 660 aa17.92■□□□□ 0.46
COMMD4-219ENST00000567399 SMCR8Q8TEV9 937 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-219ENST00000567399 ESR2Q92731 530 aa17.92■□□□□ 0.46
COMMD4-219ENST00000567399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.92■□□□□ 0.46
COMMD4-219ENST00000567399 RBM8AQ9Y5S9 174 aaKnown RBP17.92■□□□□ 0.46
COMMD4-219ENST00000567399 MOGSQ13724 837 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 MAP4K1Q92918 833 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 CEP95Q96GE4 821 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 KRT23Q9C075 422 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 GOPCQ9HD26 462 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 EMILIN3Q9NT22 766 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 STX8Q9UNK0 236 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 SLC45A1Q9Y2W3 748 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 TMX2Q9Y320 296 aa17.91■□□□□ 0.46
COMMD4-219ENST00000567399 A0A1W2PRG0 241 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 GPR25O00155 361 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 TTLL1O95922 423 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 FGRP09769 529 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 CYP2C8P10632 490 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.9■□□□□ 0.46
COMMD4-219ENST00000567399 LSG1Q9H089 658 aaKnown RBP17.9■□□□□ 0.46
COMMD4-219ENST00000567399 CNNM2Q9H8M5 875 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 MTMR4Q9NYA4 1195 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 NYAP2Q9P242 653 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 GTF3C3Q9Y5Q9 886 aa17.9■□□□□ 0.46
COMMD4-219ENST00000567399 PHIPQ8WWQ0 1821 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L15C9J2P7 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L13C9JLJ4 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L11C9JVI0 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L18D6R9N7 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L22D6RA61 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L17D6RBQ6 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L19D6RCP7 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L20D6RJB6 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 FKTNO75072 461 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 USP17L24Q0WX57 530 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 RNF20Q5VTR2 975 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
COMMD4-219ENST00000567399 SPICE1Q8N0Z3 855 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 CFHR5Q9BXR6 569 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 TANGO6Q9C0B7 1094 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 NBPF3Q9H094 633 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 R3HDMLQ9H3Y0 253 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 ISY1Q9ULR0 285 aaKnown RBP17.89■□□□□ 0.45
COMMD4-219ENST00000567399 TACC3Q9Y6A5 838 aa17.89■□□□□ 0.45
COMMD4-219ENST00000567399 B4E1Z4 1266 aa17.88■□□□□ 0.45
COMMD4-219ENST00000567399 TLR2O60603 784 aa17.88■□□□□ 0.45
COMMD4-219ENST00000567399 KDM4AO75164 1064 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms