RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 FLRT1Q9NZU1 646 aa13.81□□□□□ -0.2
SPG7-216ENST00000567138 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
SPG7-216ENST00000567138 ZNFX1Q9P2E3 1918 aaKnown RBP13.81□□□□□ -0.2
SPG7-216ENST00000567138 ZNF236Q9UL36 1845 aa13.81□□□□□ -0.2
SPG7-216ENST00000567138 CNMDO75829 334 aa13.8□□□□□ -0.2
SPG7-216ENST00000567138 BAG3O95817 575 aa13.8□□□□□ -0.2
SPG7-216ENST00000567138 UQCRFS1P1P0C7P4 283 aa13.8□□□□□ -0.2
SPG7-216ENST00000567138 PLCG2P16885 1265 aa13.8□□□□□ -0.2
SPG7-216ENST00000567138 MAP2K5Q13163 448 aa13.8□□□□□ -0.2
SPG7-216ENST00000567138 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
SPG7-216ENST00000567138 METTL16Q86W50 562 aaKnown RBP13.8□□□□□ -0.2
SPG7-216ENST00000567138 LBHD1Q9BQE6 289 aaPredicted RBP13.8□□□□□ -0.2
SPG7-216ENST00000567138 A0A0G2JMZ2 1700 aa13.8□□□□□ -0.2
SPG7-216ENST00000567138 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
SPG7-216ENST00000567138 GH2P01242 217 aa13.79□□□□□ -0.2
SPG7-216ENST00000567138 CNGA1P29973 690 aa13.79□□□□□ -0.2
SPG7-216ENST00000567138 TTC39AQ5SRH9 613 aa13.79□□□□□ -0.2
SPG7-216ENST00000567138 MFSD14CQ5VZR4 134 aa13.79□□□□□ -0.2
SPG7-216ENST00000567138 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
SPG7-216ENST00000567138 FEZ1Q99689 392 aa13.79□□□□□ -0.2
SPG7-216ENST00000567138 EYSQ5T1H1 3165 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 PNMA6EA0A0J9YXQ4 647 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 BCAR3O75815 825 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 HLA-DOAP06340 250 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 RTP1P59025 263 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 PPP4CP60510 307 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 DYNLL1P63167 89 aaKnown RBP13.78□□□□□ -0.2
SPG7-216ENST00000567138 G3BP1Q13283 466 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPG7-216ENST00000567138 ZNF697Q5TEC3 545 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 FAM109BQ6ICB4 259 aaPredicted RBP13.78□□□□□ -0.2
SPG7-216ENST00000567138 FOXP4Q8IVH2 680 aaPredicted RBP13.78□□□□□ -0.2
SPG7-216ENST00000567138 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
SPG7-216ENST00000567138 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 GINM1Q9NU53 330 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 DDX20Q9UHI6 824 aaKnown RBP13.78□□□□□ -0.2
SPG7-216ENST00000567138 RABGAP1Q9Y3P9 1069 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
SPG7-216ENST00000567138 PARP14Q460N5 1801 aa13.78□□□□□ -0.2
SPG7-216ENST00000567138 SMCHD1A6NHR9 2005 aa13.77□□□□□ -0.2
SPG7-216ENST00000567138 PLXNA1Q9UIW2 1896 aa13.77□□□□□ -0.2
SPG7-216ENST00000567138 CYP2E1P05181 493 aaPredicted RBP13.77□□□□□ -0.21
SPG7-216ENST00000567138 CCNA1P78396 465 aa13.77□□□□□ -0.21
SPG7-216ENST00000567138 NPLOC4Q8TAT6 608 aa13.77□□□□□ -0.21
SPG7-216ENST00000567138 DBNDD2Q9BQY9 259 aa13.77□□□□□ -0.21
SPG7-216ENST00000567138 TNNQ9UQP3 1299 aa13.77□□□□□ -0.21
SPG7-216ENST00000567138 SLC15A5A6NIM6 579 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 GLRX3O76003 335 aaKnown RBP13.76□□□□□ -0.21
SPG7-216ENST00000567138 PTPREP23469 700 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 CYP2C19P33261 490 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 LPAR1Q92633 364 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 C12orf42Q96LP6 360 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 PIH1D3Q9NQM4 214 aaKnown RBP13.76□□□□□ -0.21
SPG7-216ENST00000567138 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 PRKAG2Q9UGJ0 569 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 ATP11BQ9Y2G3 1177 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 IVNS1ABPQ9Y6Y0 642 aa13.76□□□□□ -0.21
SPG7-216ENST00000567138 DNM1LO00429 736 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 GNAI2P04899 355 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 VCAM1P19320 739 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 ZAP70P43403 619 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 GRB14Q14449 540 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 NBR1Q14596 966 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 RAB3GAP1Q15042 981 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 TNNI3KQ59H18 835 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 GJC2Q5T442 439 aaPredicted RBP13.75□□□□□ -0.21
SPG7-216ENST00000567138 ANO1Q5XXA6 986 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 ACER1Q8TDN7 264 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 PRDM5Q9NQX1 630 aaPredicted RBP13.75□□□□□ -0.21
SPG7-216ENST00000567138 FPGT-TNNI3KV9GXZ4 949 aa13.75□□□□□ -0.21
SPG7-216ENST00000567138 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
SPG7-216ENST00000567138 MSCO60682 206 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 CYBAP13498 195 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 CYP7A1P22680 504 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 USP5P45974 858 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 SHHQ15465 462 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 CCDC158Q5M9N0 1113 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 C9orf50Q5SZB4 431 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 MIGA1Q8NAN2 632 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 SPOCK2Q92563 424 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
SPG7-216ENST00000567138 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 PRUNE2Q8WUY3 3088 aa13.74□□□□□ -0.21
SPG7-216ENST00000567138 IPO8O15397 1037 aaKnown RBP13.73□□□□□ -0.21
SPG7-216ENST00000567138 HOXC6P09630 235 aa13.73□□□□□ -0.21
SPG7-216ENST00000567138 OS9Q13438 667 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms