RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CNTNAP5Q8WYK1 1306 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 SMTNL1A8MU46 457 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 PRR29P0C7W0 189 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 TPM4P67936 248 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 TFAP4Q01664 338 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 MYRIPQ8NFW9 859 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 WDR66Q8TBY9 1149 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 TGFBRAP1Q8WUH2 860 aa21.46■■□□□ 1.03
MSLN-207ENST00000566549 TRIM75PA6NK02 468 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 UFL1O94874 794 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 SBK1Q52WX2 424 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 ZNF804AQ7Z570 1209 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 CEP131Q9UPN4 1083 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 SRPRBQ9Y5M8 271 aaKnown RBP21.45■■□□□ 1.02
MSLN-207ENST00000566549 SKILP12757 684 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 TMC6Q7Z403 805 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 SLC44A5Q8NCS7 719 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 PRIMPOLQ96LW4 560 aa21.45■■□□□ 1.02
MSLN-207ENST00000566549 SAP30BPQ9UHR5 308 aaKnown RBP21.45■■□□□ 1.02
MSLN-207ENST00000566549 BMP6P22004 513 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 ZNF174Q15697 407 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 ZNF827Q17R98 1081 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 HSP90AA4PQ58FG1 418 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 MAPKAPK5Q8IW41 473 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 HSD3B7Q9H2F3 369 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 GYS1P13807 737 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 HSP90AA2PQ14568 343 aaPredicted RBP21.44■■□□□ 1.02
MSLN-207ENST00000566549 POSTNQ15063 836 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 RCSD1Q6JBY9 416 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 OLFM4Q6UX06 510 aa21.44■■□□□ 1.02
MSLN-207ENST00000566549 USP17L3A6NCW0 530 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 USP17L4A6NCW7 530 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 MDM2Q00987 491 aaPredicted RBP21.43■■□□□ 1.02
MSLN-207ENST00000566549 NPY5RQ15761 445 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 TPD52L1Q16890 204 aaPredicted RBP21.43■■□□□ 1.02
MSLN-207ENST00000566549 C12orf60Q5U649 245 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 USP17L1Q7RTZ2 530 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 KAT14Q9H8E8 782 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 MKNK2Q9HBH9 465 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 BRMS1Q9HCU9 246 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 IL17RBQ9NRM6 502 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 ADAMTS3O15072 1205 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 SERPINB2P05120 415 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 FANCCQ00597 558 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 MYL5Q02045 173 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 PTPN21Q16825 1174 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 EPSTI1Q96J88 318 aa21.43■■□□□ 1.02
MSLN-207ENST00000566549 MKRN1Q9UHC7 482 aaKnown RBP21.43■■□□□ 1.02
MSLN-207ENST00000566549 USP27XA6NNY8 438 aa21.42■■□□□ 1.02
MSLN-207ENST00000566549 DYNC1I1O14576 645 aa21.42■■□□□ 1.02
MSLN-207ENST00000566549 BCL11BQ9C0K0 894 aaPredicted RBP21.42■■□□□ 1.02
MSLN-207ENST00000566549 TAF1LQ8IZX4 1826 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 IKBKBO14920 756 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 PLCD1P51178 756 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 NLRP5P59047 1200 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 CCZ1BP86790 482 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 CCZ1P86791 482 aaPredicted RBP21.41■■□□□ 1.02
MSLN-207ENST00000566549 DHX58Q96C10 678 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 MAN1B1Q9UKM7 699 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 BAZ2BQ9UIF8 2168 aaKnown RBP21.41■■□□□ 1.02
MSLN-207ENST00000566549 BAG3O95817 575 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 SCG2P13521 617 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 ST5P78524 1137 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 PIK3AP1Q6ZUJ8 805 aa21.41■■□□□ 1.02
MSLN-207ENST00000566549 NOL10Q9BSC4 688 aaKnown RBP21.41■■□□□ 1.02
MSLN-207ENST00000566549 HOOK1Q9UJC3 728 aaKnown RBP21.41■■□□□ 1.02
MSLN-207ENST00000566549 SERPINC1P01008 464 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 STAG2Q8N3U4 1231 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 DPF2Q92785 391 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 GPKOWQ92917 476 aaPredicted RBP eCLIP21.4■■□□□ 1.02
MSLN-207ENST00000566549 FANCLQ9NW38 375 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 A0A087X0B3 334 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 ACTN4O43707 911 aaKnown RBP21.4■■□□□ 1.02
MSLN-207ENST00000566549 ZNF579Q8NAF0 562 aaKnown RBP21.4■■□□□ 1.02
MSLN-207ENST00000566549 PNMA1Q8ND90 353 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 CD209Q9NNX6 404 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 TRMT1Q9NXH9 659 aaKnown RBP21.4■■□□□ 1.02
MSLN-207ENST00000566549 LY75O60449 1722 aa21.4■■□□□ 1.02
MSLN-207ENST00000566549 RIOK3O14730 519 aaKnown RBP21.39■■□□□ 1.02
MSLN-207ENST00000566549 NEMFO60524 1076 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 TSPY3P0CV98 308 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 TSPY8P0CW00 308 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 TNNT1P13805 278 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 GSTO1P78417 241 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 TTC38Q5R3I4 469 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 TNFRSF25Q93038 417 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 GGA1Q9UJY5 639 aa21.39■■□□□ 1.02
MSLN-207ENST00000566549 ADRA2BP18089 450 aa21.39■■□□□ 1.01
MSLN-207ENST00000566549 CASP1P29466 404 aa21.39■■□□□ 1.01
MSLN-207ENST00000566549 BTDP43251 543 aa21.39■■□□□ 1.01
MSLN-207ENST00000566549 AFMP43652 599 aa21.39■■□□□ 1.01
MSLN-207ENST00000566549 SYMPKQ92797 1274 aaKnown RBP21.39■■□□□ 1.01
MSLN-207ENST00000566549 SMARCE1Q969G3 411 aa21.39■■□□□ 1.01
MSLN-207ENST00000566549 STX8Q9UNK0 236 aa21.39■■□□□ 1.01
MSLN-207ENST00000566549 VWA3AA6NCI4 1184 aa21.38■■□□□ 1.01
MSLN-207ENST00000566549 HSPA1LP34931 641 aa21.38■■□□□ 1.01
MSLN-207ENST00000566549 PFKFB3Q16875 520 aaPredicted RBP21.38■■□□□ 1.01
MSLN-207ENST00000566549 AMOTL1Q8IY63 956 aa21.38■■□□□ 1.01
MSLN-207ENST00000566549 TRMT44Q8IYL2 757 aaKnown RBP21.38■■□□□ 1.01
MSLN-207ENST00000566549 TRPC5Q9UL62 973 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms