RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 USP14P54578 494 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 ERVK-24P63145 666 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 USP17L24Q0WX57 530 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.63□□□□□ -0.23
FANCA-219ENST00000566133 FEZ1Q99689 392 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 CRNKL1Q9BZJ0 848 aaKnown RBP13.63□□□□□ -0.23
FANCA-219ENST00000566133 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.23
FANCA-219ENST00000566133 BOLA2Q9H3K6 86 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 CHMP4BQ9H444 224 aaKnown RBP13.63□□□□□ -0.23
FANCA-219ENST00000566133 MCM9Q9NXL9 1143 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 ZNF532Q9HCE3 1301 aa13.63□□□□□ -0.23
FANCA-219ENST00000566133 ATAD5Q96QE3 1844 aa13.62□□□□□ -0.23
FANCA-219ENST00000566133 EVI5O60447 810 aa13.62□□□□□ -0.23
FANCA-219ENST00000566133 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
FANCA-219ENST00000566133 CATSPERGQ6ZRH7 1159 aa13.62□□□□□ -0.23
FANCA-219ENST00000566133 NECAB2Q7Z6G3 386 aa13.62□□□□□ -0.23
FANCA-219ENST00000566133 ACER1Q8TDN7 264 aa13.62□□□□□ -0.23
FANCA-219ENST00000566133 GTF3C2Q8WUA4 911 aaPredicted RBP13.62□□□□□ -0.23
FANCA-219ENST00000566133 EDC3Q96F86 508 aaKnown RBP13.62□□□□□ -0.23
FANCA-219ENST00000566133 PORCNQ9H237 461 aa13.62□□□□□ -0.23
FANCA-219ENST00000566133 CWC22Q9HCG8 908 aaKnown RBP13.62□□□□□ -0.23
FANCA-219ENST00000566133 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
FANCA-219ENST00000566133 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
FANCA-219ENST00000566133 XRCC5P13010 732 aaKnown RBP13.61□□□□□ -0.23
FANCA-219ENST00000566133 SHMT1P34896 483 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 GPR142Q7Z601 462 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 PLEKHH3Q7Z736 793 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 SDR42E1Q8WUS8 393 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 TRIB2Q92519 343 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 KIAA1683Q9H0B3 1180 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 RABGAP1Q9Y3P9 1069 aa13.61□□□□□ -0.23
FANCA-219ENST00000566133 MAST2Q6P0Q8 1798 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 GUCY1A2P33402 732 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 EVX2Q03828 476 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 GABPAQ06546 454 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 SEPT2Q15019 361 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 LCORLQ8N3X6 602 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 ARMT1Q9H993 441 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
FANCA-219ENST00000566133 PAG1Q9NWQ8 432 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
FANCA-219ENST00000566133 PRKAB2O43741 272 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 CNMDO75829 334 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
FANCA-219ENST00000566133 ATP5JP18859 108 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 RGS2P41220 211 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 CCNA1P78396 465 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 CACNB2Q08289 660 aaPredicted RBP13.59□□□□□ -0.23
FANCA-219ENST00000566133 SLFNL1Q499Z3 407 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 MORN1Q5T089 497 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
FANCA-219ENST00000566133 ANKLE1Q8NAG6 615 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 DIS3LQ8TF46 1054 aaKnown RBP13.59□□□□□ -0.23
FANCA-219ENST00000566133 USP6NLQ92738 828 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 HOXC10Q9NYD6 342 aa13.59□□□□□ -0.23
FANCA-219ENST00000566133 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
FANCA-219ENST00000566133 CYP2D6P10635 497 aa13.58□□□□□ -0.24
FANCA-219ENST00000566133 VCAM1P19320 739 aa13.58□□□□□ -0.24
FANCA-219ENST00000566133 CCL14Q16627 93 aa13.58□□□□□ -0.24
FANCA-219ENST00000566133 DYNLL2Q96FJ2 89 aa13.58□□□□□ -0.24
FANCA-219ENST00000566133 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
FANCA-219ENST00000566133 RPAP3Q9H6T3 665 aaPredicted RBP13.58□□□□□ -0.24
FANCA-219ENST00000566133 OGDHLQ9ULD0 1010 aa13.58□□□□□ -0.24
FANCA-219ENST00000566133 MYH1P12882 1939 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 A0A1W2PRG0 241 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
FANCA-219ENST00000566133 PTPREP23469 700 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 ADD2P35612 726 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 COG2Q14746 738 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 HAUS7Q99871 368 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 LRRCC1Q9C099 1032 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.57□□□□□ -0.244e-8■■■■■ 39.3
FANCA-219ENST00000566133 ATP8A2Q9NTI2 1148 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 BTBD7Q9P203 1132 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 STAP2Q9UGK3 403 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 SWAP70Q9UH65 585 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 LOC285556D6RIA3 1793 aa13.57□□□□□ -0.24
FANCA-219ENST00000566133 USP17L12C9JPN9 530 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 USP17L21D6R901 530 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 SMARCA5O60264 1052 aaPredicted RBP13.56□□□□□ -0.24
FANCA-219ENST00000566133 MBD4O95243 580 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 CHGBP05060 677 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 CCND3P30281 292 aaPredicted RBP13.56□□□□□ -0.24
FANCA-219ENST00000566133 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
FANCA-219ENST00000566133 LBX2Q6XYB7 198 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 SLC44A5Q8NCS7 719 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 C11orf49Q9H6J7 331 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 IVNS1ABPQ9Y6Y0 642 aa13.56□□□□□ -0.24
FANCA-219ENST00000566133 SLC15A5A6NIM6 579 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms