RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 ZNF713Q8N859 430 aaPredicted RBP7.3□□□□□ -1.24
LINC01043-201ENST00000565936 CDHR1Q96JP9 859 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 RPAP1Q9BWH6 1393 aaPredicted RBP7.3□□□□□ -1.24
LINC01043-201ENST00000565936 TRAF5O00463 557 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 TACC1O75410 805 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 URI1O94763 535 aaPredicted RBP7.3□□□□□ -1.24
LINC01043-201ENST00000565936 DNM1Q05193 864 aaKnown RBP7.3□□□□□ -1.24
LINC01043-201ENST00000565936 FOXP4Q8IVH2 680 aaPredicted RBP7.3□□□□□ -1.24
LINC01043-201ENST00000565936 ZNF274Q96GC6 653 aaPredicted RBP7.3□□□□□ -1.24
LINC01043-201ENST00000565936 CCPG1Q9ULG6 757 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 SNX14Q9Y5W7 946 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 CPSF1Q10570 1443 aaKnown RBP7.3□□□□□ -1.24
LINC01043-201ENST00000565936 TTLL1O95922 423 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 ABCD1P33897 745 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 FAM47AQ5JRC9 791 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 PNMA1Q8ND90 353 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 SLC17A8Q8NDX2 589 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 FAM200AQ8TCP9 573 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 ADPGKQ9BRR6 497 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 DACT1Q9NYF0 836 aa7.3□□□□□ -1.24
LINC01043-201ENST00000565936 CCDC14Q49A88 953 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 APOBEC3FQ8IUX4 373 aaKnown RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 DBNDD1Q9H9R9 158 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 TRPC6Q9Y210 931 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 COL15A1P39059 1388 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 TESPA1A2RU30 521 aaPredicted RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 MRPS9P82933 396 aaKnown RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 SMC1AQ14683 1233 aaKnown RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 CEP135Q66GS9 1140 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 DEPTORQ8TB45 409 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 KIAA1524Q8TCG1 905 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 USP17L8P0C7I0 530 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 EEF2P13639 858 aaKnown RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 LRRC24Q50LG9 513 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 FAM160B2Q86V87 743 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 GOLGA5Q8TBA6 731 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 TEKT3Q9BXF9 490 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 JADE2Q9NQC1 790 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 GINS2Q9Y248 185 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 TRPM1Q7Z4N2 1603 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 HARSP12081 509 aaKnown RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 ATF7P17544 494 aaPredicted RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 TRIM14Q14142 442 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 TXNRD1Q16881 649 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 AMNQ9BXJ7 453 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 MAK16Q9BXY0 300 aaKnown RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 CD2APQ9Y5K6 639 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 C1orf167Q5SNV9 1468 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 DDX39AO00148 427 aaKnown RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 FAM193AP78312 1265 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 UBXN1Q04323 297 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 DCAF17Q5H9S7 520 aaPredicted RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 LIN9Q5TKA1 542 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 PODNQ7Z5L7 613 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 ZSCAN30Q86W11 494 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 CCDC42Q96M95 316 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 FAM193BQ96PV7 902 aaPredicted RBP7.29□□□□□ -1.24
LINC01043-201ENST00000565936 USP31Q70CQ4 1352 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 NCOA3Q9Y6Q9 1424 aa7.29□□□□□ -1.24
LINC01043-201ENST00000565936 KRT86O43790 486 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 TMCO3Q6UWJ1 677 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 TSGA10Q9BZW7 698 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 SERPINB13Q9UIV8 391 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 CLRN2A0PK11 232 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 RAD17O75943 681 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 FERP16591 822 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 HOXD10P28358 340 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 FAM160A1Q05DH4 1040 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 KIF5AQ12840 1032 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 TFDP1Q14186 410 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 HLTFQ14527 1009 aaKnown RBP eCLIP7.28□□□□□ -1.24
LINC01043-201ENST00000565936 TAF3Q5VWG9 929 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 MYCT1Q8N699 235 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 CCDC102AQ96A19 550 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 ARHGEF40Q8TER5 1519 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 KLRF2D3W0D1 207 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 TUBB4BP68371 445 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 ANO6Q4KMQ2 910 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 RC3H1Q5TC82 1133 aaKnown RBP7.28□□□□□ -1.24
LINC01043-201ENST00000565936 GABPB2Q8TAK5 448 aaPredicted RBP7.28□□□□□ -1.24
LINC01043-201ENST00000565936 SRP68Q9UHB9 627 aaKnown RBP7.28□□□□□ -1.24
LINC01043-201ENST00000565936 CEP152O94986 1710 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 SETBP1Q9Y6X0 1596 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 PTPRMP28827 1452 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 TMEM232C9JQI7 657 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 PRPF6O94906 941 aaKnown RBP7.28□□□□□ -1.24
LINC01043-201ENST00000565936 GNA14O95837 355 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 KRT5P13647 590 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 HSPA1LP34931 641 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 PHKA1P46020 1223 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 DNA2P51530 1060 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 YARSP54577 528 aaKnown RBP7.28□□□□□ -1.24
LINC01043-201ENST00000565936 CABP7Q86V35 215 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 CCDC77Q9BR77 488 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 PCDHB13Q9Y5F0 798 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 CDC42BPBQ9Y5S2 1711 aa7.28□□□□□ -1.24
LINC01043-201ENST00000565936 XPOTO43592 962 aaKnown RBP7.28□□□□□ -1.24
LINC01043-201ENST00000565936 MAP2K1Q02750 393 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms