RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 MGAMO43451 1857 aa13.19□□□□□ -0.3
NSMCE1-210ENST00000565626 RBBP6Q7Z6E9 1792 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 INHAP05111 366 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 AKR1B1P15121 316 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 VCAM1P19320 739 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 Q3C1V9 767 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 C12orf60Q5U649 245 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 KBTBD3Q8NAB2 608 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 COA7Q96BR5 231 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 KIAA1683Q9H0B3 1180 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 RNF208Q9H0X6 261 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
NSMCE1-210ENST00000565626 IRF5Q13568 498 aa13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 SIAH1Q8IUQ4 282 aa13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 PI4K2BQ8TCG2 481 aa13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 PORCNQ9H237 461 aa13.17□□□□□ -0.3
NSMCE1-210ENST00000565626 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L15C9J2P7 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L13C9JLJ4 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L11C9JVI0 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L18D6R9N7 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L22D6RA61 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L17D6RBQ6 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L19D6RCP7 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 M0R2C6 588 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 RNF113AO15541 343 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 CNMDO75829 334 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 GJB1P08034 283 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 CDK8P49336 464 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP14P54578 494 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 ERVK-24P63145 666 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 UBXN2AP68543 259 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 TRIM32Q13049 653 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
NSMCE1-210ENST00000565626 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 CYP2B6P20813 491 aa13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 GJA8P48165 433 aa13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 TMEM179Q6ZVK1 233 aa13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 C16orf86Q6ZW13 317 aa13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 APPBP2Q92624 585 aa13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 SEC62Q99442 399 aaKnown RBP13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 RANBP2P49792 3224 aaKnown RBP13.15□□□□□ -0.3
NSMCE1-210ENST00000565626 GPAA1O43292 621 aa13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 U2AF1L4Q8WU68 220 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 DDRGK1Q96HY6 314 aa13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 DEFB118Q96PH6 123 aa13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 EPB41L4AQ9HCS5 686 aaPredicted RBP13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
NSMCE1-210ENST00000565626 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 SALL3Q9BXA9 1300 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 MYH7P12883 1935 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 SPDYE16A6NNV3 312 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 GLRX3O76003 335 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 MX1P20591 662 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 ICA1Q05084 483 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 TRIB2Q92519 343 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 RABGAP1Q9Y3P9 1069 aa13.13□□□□□ -0.31
NSMCE1-210ENST00000565626 ERC2O15083 957 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 SGPL1O95470 568 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 HMGCRP04035 888 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 EEF2P13639 858 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 MAPK4P31152 587 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 HDAC1Q13547 482 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 UBE2Q1Q7Z7E8 422 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 CCAR1Q8IX12 1150 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 USP6NLQ92738 828 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 NUDT12Q9BQG2 462 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 TANGO6Q9C0B7 1094 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms