RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 USP17L13C9JLJ4 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 USP17L11C9JVI0 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 USP17L18D6R9N7 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 USP17L22D6RA61 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 USP17L17D6RBQ6 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 USP17L19D6RCP7 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 USP17L20D6RJB6 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 PRKAB2O43741 272 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 USP17L24Q0WX57 530 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 ZYXQ15942 572 aaKnown RBP23.96■■□□□ 1.43
CLN6-206ENST00000565471 ACER1Q8TDN7 264 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 U2AF1L4Q8WU68 220 aaKnown RBP23.96■■□□□ 1.43
CLN6-206ENST00000565471 GCC1Q96CN9 775 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 GPATCH3Q96I76 525 aa23.96■■□□□ 1.43
CLN6-206ENST00000565471 CYP2D6P10635 497 aa23.95■■□□□ 1.42
CLN6-206ENST00000565471 MAPK4P31152 587 aa23.95■■□□□ 1.42
CLN6-206ENST00000565471 ERVK-9P63128 1117 aa23.95■■□□□ 1.42
CLN6-206ENST00000565471 ERVK-24P63145 666 aa23.95■■□□□ 1.42
CLN6-206ENST00000565471 SEPT2Q15019 361 aa23.95■■□□□ 1.42
CLN6-206ENST00000565471 PLXNB2O15031 1838 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 SGPL1O95470 568 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 HMGCRP04035 888 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 CHGBP05060 677 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 VCAM1P19320 739 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 CATSPERGQ6ZRH7 1159 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 UBE2Q1Q7Z7E8 422 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 AMOTL1Q8IY63 956 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 SOCS4Q8WXH5 440 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 DDRGK1Q96HY6 314 aa23.94■■□□□ 1.42
CLN6-206ENST00000565471 PAK6Q9NQU5 681 aaPredicted RBP23.94■■□□□ 1.42
CLN6-206ENST00000565471 BAZ2AQ9UIF9 1905 aaKnown RBP23.94■■□□□ 1.42
CLN6-206ENST00000565471 MPHOSPH10O00566 681 aaKnown RBP23.93■■□□□ 1.42
CLN6-206ENST00000565471 PEX10O60683 326 aa23.93■■□□□ 1.42
CLN6-206ENST00000565471 C12orf60Q5U649 245 aa23.93■■□□□ 1.42
CLN6-206ENST00000565471 POTEEQ6S8J3 1075 aa23.93■■□□□ 1.42
CLN6-206ENST00000565471 LBX2Q6XYB7 198 aa23.93■■□□□ 1.42
CLN6-206ENST00000565471 TMEM179Q6ZVK1 233 aa23.93■■□□□ 1.42
CLN6-206ENST00000565471 SLC44A5Q8NCS7 719 aa23.93■■□□□ 1.42
CLN6-206ENST00000565471 RABGAP1Q9Y3P9 1069 aa23.93■■□□□ 1.42
CLN6-206ENST00000565471 MYH8P13535 1937 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 RRP1P56182 461 aaKnown RBP23.92■■□□□ 1.42
CLN6-206ENST00000565471 Q3C1V9 767 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 KBTBD3Q8NAB2 608 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 DYNLL2Q96FJ2 89 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 NUDT12Q9BQG2 462 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 PAGR1Q9BTK6 254 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 PUS7LQ9H0K6 701 aaKnown RBP23.92■■□□□ 1.42
CLN6-206ENST00000565471 PCDHB15Q9Y5E8 787 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 SLC4A4Q9Y6R1 1079 aa23.92■■□□□ 1.42
CLN6-206ENST00000565471 USP17L12C9JPN9 530 aa23.91■■□□□ 1.42
CLN6-206ENST00000565471 USP17L21D6R901 530 aa23.91■■□□□ 1.42
CLN6-206ENST00000565471 XRCC5P13010 732 aaKnown RBP23.91■■□□□ 1.42
CLN6-206ENST00000565471 CCDC17Q96LX7 622 aa23.91■■□□□ 1.42
CLN6-206ENST00000565471 A0A1W2PRG0 241 aa23.9■■□□□ 1.42
CLN6-206ENST00000565471 CCNA1P78396 465 aa23.9■■□□□ 1.42
CLN6-206ENST00000565471 C16orf86Q6ZW13 317 aa23.9■■□□□ 1.42
CLN6-206ENST00000565471 CCAR1Q8IX12 1150 aaKnown RBP23.9■■□□□ 1.42
CLN6-206ENST00000565471 DEFB118Q96PH6 123 aa23.9■■□□□ 1.42
CLN6-206ENST00000565471 PORCNQ9H237 461 aa23.9■■□□□ 1.42
CLN6-206ENST00000565471 RPAP3Q9H6T3 665 aaPredicted RBP23.9■■□□□ 1.42
CLN6-206ENST00000565471 TTC41PQ6P2S7 1318 aa23.89■■□□□ 1.42
CLN6-206ENST00000565471 CNMDO75829 334 aa23.89■■□□□ 1.41
CLN6-206ENST00000565471 FARP2O94887 1054 aaPredicted RBP23.89■■□□□ 1.41
CLN6-206ENST00000565471 CDK8P49336 464 aa23.89■■□□□ 1.41
CLN6-206ENST00000565471 GPR142Q7Z601 462 aa23.89■■□□□ 1.41
CLN6-206ENST00000565471 CRISPLD2Q9H0B8 497 aa23.89■■□□□ 1.41
CLN6-206ENST00000565471 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.89■■□□□ 1.414e-8■■■■□ 25.2
CLN6-206ENST00000565471 RPTORQ8N122 1335 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 CYP2D7A0A087X1C5 515 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 ZFYP08048 801 aaPredicted RBP23.88■■□□□ 1.41
CLN6-206ENST00000565471 AKR1B1P15121 316 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 CYP2B6P20813 491 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 MORN1Q5T089 497 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 TSHZ3Q63HK5 1081 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 CTR9Q6PD62 1173 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 PLEKHH3Q7Z736 793 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 TRMT44Q8IYL2 757 aaKnown RBP23.88■■□□□ 1.41
CLN6-206ENST00000565471 TRIB2Q92519 343 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 APPBP2Q92624 585 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 USP6NLQ92738 828 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 STRBPQ96SI9 672 aaKnown RBP23.88■■□□□ 1.41
CLN6-206ENST00000565471 HTATIP2Q9BUP3 242 aa23.88■■□□□ 1.41
CLN6-206ENST00000565471 ARPP21Q9UBL0 812 aaPredicted RBP23.88■■□□□ 1.41
CLN6-206ENST00000565471 SPDYE16A6NNV3 312 aaPredicted RBP23.87■■□□□ 1.41
CLN6-206ENST00000565471 GIMAP6Q6P9H5 292 aa23.87■■□□□ 1.41
CLN6-206ENST00000565471 LPAR1Q92633 364 aa23.87■■□□□ 1.41
CLN6-206ENST00000565471 SH2D4AQ9H788 454 aa23.87■■□□□ 1.41
CLN6-206ENST00000565471 ARHGEF10LQ9HCE6 1279 aa23.87■■□□□ 1.41
CLN6-206ENST00000565471 HMX1Q9NP08 348 aaPredicted RBP23.87■■□□□ 1.41
CLN6-206ENST00000565471 SMIM22K7EJ46 135 aa23.86■■□□□ 1.41
CLN6-206ENST00000565471 RNF113AO15541 343 aaKnown RBP23.86■■□□□ 1.41
CLN6-206ENST00000565471 TFRCP02786 760 aaKnown RBP23.86■■□□□ 1.41
CLN6-206ENST00000565471 RGS2P41220 211 aa23.86■■□□□ 1.41
CLN6-206ENST00000565471 ICA1Q05084 483 aa23.86■■□□□ 1.41
CLN6-206ENST00000565471 MAP3K21Q5TCX8 1036 aa23.86■■□□□ 1.41
CLN6-206ENST00000565471 SIAH1Q8IUQ4 282 aa23.86■■□□□ 1.41
CLN6-206ENST00000565471 TMX2Q9Y320 296 aa23.86■■□□□ 1.41
CLN6-206ENST00000565471 ERC2O15083 957 aa23.85■■□□□ 1.41
CLN6-206ENST00000565471 GLRX3O76003 335 aaKnown RBP23.85■■□□□ 1.41
CLN6-206ENST00000565471 TRIM32Q13049 653 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms