RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 USP17L7P0C7H9 530 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 ITGAEP38570 1179 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 THAP5Q7Z6K1 395 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 TTC6Q86TZ1 520 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 TMEM87AQ8NBN3 555 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 GRIN3AQ8TCU5 1115 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 CAPN6Q9Y6Q1 641 aa7.34□□□□□ -1.23
CHD9-215ENST00000565442 SRFP11831 508 aa7.33□□□□□ -1.24
CHD9-215ENST00000565442 IRF2BPLQ9H1B7 796 aa7.33□□□□□ -1.24
CHD9-215ENST00000565442 PARD6AQ9NPB6 346 aa7.33□□□□□ -1.24
CHD9-215ENST00000565442 FAM8A1Q9UBU6 413 aa7.33□□□□□ -1.24
CHD9-215ENST00000565442 TCF3P15923 654 aa7.32□□□□□ -1.24
CHD9-215ENST00000565442 ZNF507Q8TCN5 953 aa7.32□□□□□ -1.24
CHD9-215ENST00000565442 MYLIPQ8WY64 445 aa7.32□□□□□ -1.24
CHD9-215ENST00000565442 CRELD1Q96HD1 420 aa7.32□□□□□ -1.24
CHD9-215ENST00000565442 NECAB3Q96P71 396 aaPredicted RBP7.32□□□□□ -1.24
CHD9-215ENST00000565442 MIPEPQ99797 713 aa7.32□□□□□ -1.24
CHD9-215ENST00000565442 SRCIN1Q9C0H9 1055 aa7.32□□□□□ -1.24
CHD9-215ENST00000565442 IGSF5Q9NSI5 407 aa7.32□□□□□ -1.24
CHD9-215ENST00000565442 DNAJC25-GNG10A0A024R161 153 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 BMP6P22004 513 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 ERVFC1P60507 584 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 RALGPS1Q5JS13 557 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 UBE2FQ969M7 185 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 ELMO3Q96BJ8 720 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 TMEM59LQ9UK28 342 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 PCDHA4Q9UN74 947 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 SAMM50Q9Y512 469 aa7.31□□□□□ -1.24
CHD9-215ENST00000565442 GSTT1P30711 240 aa7.3□□□□□ -1.24
CHD9-215ENST00000565442 C9orf131Q5VYM1 1079 aa7.3□□□□□ -1.24
CHD9-215ENST00000565442 FBRSQ9HAH7 460 aa7.3□□□□□ -1.24
CHD9-215ENST00000565442 ZSWIM5Q9P217 1185 aa7.3□□□□□ -1.24
CHD9-215ENST00000565442 SCAMP3O14828 347 aaKnown RBP7.29□□□□□ -1.24
CHD9-215ENST00000565442 HPXP02790 462 aa7.29□□□□□ -1.24
CHD9-215ENST00000565442 HK2P52789 917 aa7.29□□□□□ -1.24
CHD9-215ENST00000565442 ZNF746Q6NUN9 644 aaPredicted RBP7.29□□□□□ -1.24
CHD9-215ENST00000565442 LLGL2Q6P1M3 1020 aa7.29□□□□□ -1.24
CHD9-215ENST00000565442 C3orf58Q8NDZ4 430 aa7.29□□□□□ -1.24
CHD9-215ENST00000565442 A0A0G2JLL6 359 aaPredicted RBP7.28□□□□□ -1.24
CHD9-215ENST00000565442 PRAMEF27A3QJZ7 478 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 ENC1O14682 589 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 PAGE1O75459 146 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 CBX7O95931 251 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 HDLBPQ00341 1268 aaKnown RBP7.28□□□□□ -1.24
CHD9-215ENST00000565442 SLBPQ14493 270 aaKnown RBP eCLIP7.28□□□□□ -1.24
CHD9-215ENST00000565442 TAF1CQ15572 869 aaPredicted RBP7.28□□□□□ -1.24
CHD9-215ENST00000565442 TPTE2Q6XPS3 522 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 MFSD2AQ8NA29 543 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 ZCCHC4Q9H5U6 513 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 USP31Q70CQ4 1352 aa7.28□□□□□ -1.24
CHD9-215ENST00000565442 FOXD2O60548 495 aaPredicted RBP7.27□□□□□ -1.25
CHD9-215ENST00000565442 FBXO24O75426 580 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 BMP7P18075 431 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 ZNF76P36508 570 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 CAP2P40123 477 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 FANCCQ00597 558 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 LRRC14Q15048 493 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 SCARA3Q6AZY7 606 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 LETMD1Q6P1Q0 360 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 RIN3Q8TB24 985 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 CEP44Q9C0F1 390 aa7.27□□□□□ -1.25
CHD9-215ENST00000565442 TTF2Q9UNY4 1162 aaKnown RBP7.27□□□□□ -1.25
CHD9-215ENST00000565442 ESR1P03372 595 aa7.26□□□□□ -1.25
CHD9-215ENST00000565442 NKG7Q16617 165 aa7.26□□□□□ -1.25
CHD9-215ENST00000565442 RASIP1Q5U651 963 aa7.26□□□□□ -1.25
CHD9-215ENST00000565442 TMPRSS7Q7RTY8 843 aa7.26□□□□□ -1.25
CHD9-215ENST00000565442 RNF34Q969K3 372 aa7.26□□□□□ -1.25
CHD9-215ENST00000565442 COX4I2Q96KJ9 171 aa7.26□□□□□ -1.25
CHD9-215ENST00000565442 RNF32Q9H0A6 362 aa7.26□□□□□ -1.25
CHD9-215ENST00000565442 KIR3DL1P43629 444 aa7.25□□□□□ -1.25
CHD9-215ENST00000565442 TNK2Q07912 1038 aa7.25□□□□□ -1.25
CHD9-215ENST00000565442 INPP5AQ14642 412 aa7.25□□□□□ -1.25
CHD9-215ENST00000565442 LRFN4Q6PJG9 635 aa7.25□□□□□ -1.25
CHD9-215ENST00000565442 BAHD1Q8TBE0 780 aaPredicted RBP7.25□□□□□ -1.25
CHD9-215ENST00000565442 MCOLN1Q9GZU1 580 aa7.25□□□□□ -1.25
CHD9-215ENST00000565442 METTL5Q9NRN9 209 aaKnown RBP7.25□□□□□ -1.25
CHD9-215ENST00000565442 SYN1P17600 705 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 CYP7A1P22680 504 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 TRHRP34981 398 aaPredicted RBP7.24□□□□□ -1.25
CHD9-215ENST00000565442 ST13P50502 369 aaKnown RBP7.24□□□□□ -1.25
CHD9-215ENST00000565442 DLG4P78352 724 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 CCDC85BQ15834 202 aaPredicted RBP7.24□□□□□ -1.25
CHD9-215ENST00000565442 KRTAP5-3Q6L8H2 238 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 DBX2Q6ZNG2 339 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 METTL16Q86W50 562 aaKnown RBP7.24□□□□□ -1.25
CHD9-215ENST00000565442 NT5DC4Q86YG4 428 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 IRF2BP1Q8IU81 584 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 KCNC2Q96PR1 638 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 WNT10AQ9GZT5 417 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 ADAMTS10Q9H324 1103 aa7.24□□□□□ -1.25
CHD9-215ENST00000565442 SEMA7AO75326 666 aa7.23□□□□□ -1.25
CHD9-215ENST00000565442 ERCC5P28715 1186 aaPredicted RBP7.23□□□□□ -1.25
CHD9-215ENST00000565442 NFIXQ14938 502 aa7.23□□□□□ -1.25
CHD9-215ENST00000565442 HDXQ7Z353 690 aa7.23□□□□□ -1.25
CHD9-215ENST00000565442 SLC6A17Q9H1V8 727 aa7.23□□□□□ -1.25
CHD9-215ENST00000565442 PPM1HQ9ULR3 514 aa7.23□□□□□ -1.25
CHD9-215ENST00000565442 RBAK-RBAKDNI3L0D1 243 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
CHD9-215ENST00000565442 PRAMEF13Q5VWM6 474 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms