RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 EVI5O60447 810 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 PDE6AP16499 860 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 MAPK4P31152 587 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 RAB3GAP1Q15042 981 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 ZYXQ15942 572 aaKnown RBP10.43□□□□□ -0.74
CAPN3-213ENST00000565173 ABCB5Q2M3G0 1257 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 SLC9C2Q5TAH2 1124 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 CATSPERGQ6ZRH7 1159 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 GPR142Q7Z601 462 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 NECAB2Q7Z6G3 386 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 TTC6Q86TZ1 520 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 RPAP2Q8IXW5 612 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-213ENST00000565173 ANKLE1Q8NAG6 615 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.43□□□□□ -0.74
CAPN3-213ENST00000565173 SOCS4Q8WXH5 440 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 KIF1BPQ96EK5 621 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 EDC3Q96F86 508 aaKnown RBP10.43□□□□□ -0.74
CAPN3-213ENST00000565173 NUDT12Q9BQG2 462 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 OGDHLQ9ULD0 1010 aa10.43□□□□□ -0.74
CAPN3-213ENST00000565173 DDX60LQ5H9U9 1706 aaKnown RBP10.43□□□□□ -0.74
CAPN3-213ENST00000565173 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 ZNF532Q9HCE3 1301 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 GOLIM4O00461 696 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 PRKAR2AP13861 404 aaKnown RBP10.42□□□□□ -0.74
CAPN3-213ENST00000565173 VCAM1P19320 739 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 CACNB2Q08289 660 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-213ENST00000565173 TTF1Q15361 905 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-213ENST00000565173 CCL14Q16627 93 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 LHX8Q68G74 356 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 LBX2Q6XYB7 198 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 CLASRPQ8N2M8 674 aaKnown RBP10.42□□□□□ -0.74
CAPN3-213ENST00000565173 GTF3C2Q8WUA4 911 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-213ENST00000565173 PAGR1Q9BTK6 254 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 DCP1AQ9NPI6 582 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-213ENST00000565173 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 RABGAP1Q9Y3P9 1069 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 ALPK3Q96L96 1907 aa10.42□□□□□ -0.74
CAPN3-213ENST00000565173 A0A1W2PRG0 241 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 APBB1O00213 710 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 POLR3DP05423 398 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-213ENST00000565173 MS4A1P11836 297 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 USP14P54578 494 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 SEPT2Q15019 361 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 PLEKHH3Q7Z736 793 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 SIAH1Q8IUQ4 282 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
CAPN3-213ENST00000565173 LCORLQ8N3X6 602 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 SDR42E1Q8WUS8 393 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 FEZ1Q99689 392 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 NBPF3Q9H094 633 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 BTBD7Q9P203 1132 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 STAP2Q9UGK3 403 aa10.41□□□□□ -0.74
CAPN3-213ENST00000565173 PFASO15067 1338 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 SMIM22K7EJ46 135 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 PRKAB2O43741 272 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 RAB11FIP3O75154 756 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 IGHA2P01877 340 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 CHGBP05060 677 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 IFIT2P09913 472 aaKnown RBP10.4□□□□□ -0.74
CAPN3-213ENST00000565173 CYP2D6P10635 497 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 COL6A1P12109 1028 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 ZKSCAN1P17029 563 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-213ENST00000565173 ATP5JP18859 108 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 CCND3P30281 292 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-213ENST00000565173 RGS2P41220 211 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 MAP2K5Q13163 448 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 PDE3AQ14432 1141 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 KIAA1755Q5JYT7 1200 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 SLC44A5Q8NCS7 719 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 DNAJC2Q99543 621 aaKnown RBP10.4□□□□□ -0.74
CAPN3-213ENST00000565173 CRNKL1Q9BZJ0 848 aaKnown RBP10.4□□□□□ -0.74
CAPN3-213ENST00000565173 C11orf49Q9H6J7 331 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 RPAP3Q9H6T3 665 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-213ENST00000565173 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 MCM9Q9NXL9 1143 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 FLRT1Q9NZU1 646 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 DDX19BQ9UMR2 479 aa10.4□□□□□ -0.74
CAPN3-213ENST00000565173 A0A1W2PPC1 479 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 SPDYE16A6NNV3 312 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-213ENST00000565173 HMMRO75330 724 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 HOXC6P09630 235 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 PTPREP23469 700 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 ADD2P35612 726 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 CCAR1Q8IX12 1150 aaKnown RBP10.39□□□□□ -0.75
CAPN3-213ENST00000565173 DYNLL2Q96FJ2 89 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 APBA2Q99767 749 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 HAUS7Q99871 368 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 GDF15Q99988 308 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 ARMT1Q9H993 441 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 PAG1Q9NWQ8 432 aa10.39□□□□□ -0.75
CAPN3-213ENST00000565173 NAV1Q8NEY1 1877 aa10.38□□□□□ -0.75
CAPN3-213ENST00000565173 SLC15A5A6NIM6 579 aa10.38□□□□□ -0.75
CAPN3-213ENST00000565173 SOX1O00570 391 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-213ENST00000565173 BMP8BP34820 402 aa10.38□□□□□ -0.75
CAPN3-213ENST00000565173 CCNA1P78396 465 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms