RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 UNC93B1Q9H1C4 597 aa17.79■□□□□ 0.44
USB1-210ENST00000565151 A0A0G2JMZ2 1700 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 CNMDO75829 334 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 IRF5Q13568 498 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 RAB3GAP1Q15042 981 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 CLEC10AQ8IUN9 316 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 CRBNQ96SW2 442 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 TMOD4Q9NZQ9 345 aa17.78■□□□□ 0.44
USB1-210ENST00000565151 TRIM32Q13049 653 aa17.77■□□□□ 0.44
USB1-210ENST00000565151 PABPC4Q13310 644 aaKnown RBP eCLIP17.77■□□□□ 0.44
USB1-210ENST00000565151 USP17L2Q6R6M4 530 aa17.77■□□□□ 0.44
USB1-210ENST00000565151 UBE2Q1Q7Z7E8 422 aa17.77■□□□□ 0.44
USB1-210ENST00000565151 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.44
USB1-210ENST00000565151 KIAA1683Q9H0B3 1180 aa17.77■□□□□ 0.44
USB1-210ENST00000565151 FRMPD3Q5JV73 1810 aa17.77■□□□□ 0.43
USB1-210ENST00000565151 MYH4Q9Y623 1939 aa17.76■□□□□ 0.43
USB1-210ENST00000565151 INHAP05111 366 aa17.76■□□□□ 0.43
USB1-210ENST00000565151 IRX3P78415 501 aaPredicted RBP17.76■□□□□ 0.43
USB1-210ENST00000565151 C12orf60Q5U649 245 aa17.76■□□□□ 0.43
USB1-210ENST00000565151 PI4K2BQ8TCG2 481 aa17.76■□□□□ 0.43
USB1-210ENST00000565151 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
USB1-210ENST00000565151 PORCNQ9H237 461 aa17.76■□□□□ 0.43
USB1-210ENST00000565151 SALL3Q9BXA9 1300 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 USP17L12C9JPN9 530 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 USP17L21D6R901 530 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 GJB1P08034 283 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 AKR1B1P15121 316 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 VCAM1P19320 739 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 GJA8P48165 433 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 PXYLP1Q8TE99 480 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 STRBPQ96SI9 672 aaKnown RBP17.75■□□□□ 0.43
USB1-210ENST00000565151 RNF208Q9H0X6 261 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
USB1-210ENST00000565151 CEP290O15078 2479 aa17.74■□□□□ 0.43
USB1-210ENST00000565151 CTR9Q6PD62 1173 aa17.74■□□□□ 0.43
USB1-210ENST00000565151 CATSPERGQ6ZRH7 1159 aa17.74■□□□□ 0.43
USB1-210ENST00000565151 KBTBD3Q8NAB2 608 aa17.74■□□□□ 0.43
USB1-210ENST00000565151 COA7Q96BR5 231 aa17.74■□□□□ 0.43
USB1-210ENST00000565151 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
USB1-210ENST00000565151 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.74■□□□□ 0.43
USB1-210ENST00000565151 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
USB1-210ENST00000565151 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 CDK8P49336 464 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 ERVK-9P63128 1117 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 ERVK-24P63145 666 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 GPRC5AQ8NFJ5 357 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 USP6NLQ92738 828 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 FEZ1Q99689 392 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
USB1-210ENST00000565151 BTBD7Q9P203 1132 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 SLC4A4Q9Y6R1 1079 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 DNAH12Q6ZR08 3092 aa17.73■□□□□ 0.43
USB1-210ENST00000565151 USP17L15C9J2P7 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L13C9JLJ4 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L11C9JVI0 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L18D6R9N7 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L22D6RA61 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L17D6RBQ6 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L19D6RCP7 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L20D6RJB6 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 M0R2C6 588 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 USP17L24Q0WX57 530 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 TRIB2Q92519 343 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 SEC62Q99442 399 aaKnown RBP17.72■□□□□ 0.43
USB1-210ENST00000565151 PAGR1Q9BTK6 254 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 RPAP3Q9H6T3 665 aaPredicted RBP17.72■□□□□ 0.43
USB1-210ENST00000565151 EPB41L4AQ9HCS5 686 aaPredicted RBP17.72■□□□□ 0.43
USB1-210ENST00000565151 CABP5Q9NP86 173 aa17.72■□□□□ 0.43
USB1-210ENST00000565151 PAK6Q9NQU5 681 aaPredicted RBP17.72■□□□□ 0.43
USB1-210ENST00000565151 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
USB1-210ENST00000565151 MPHOSPH10O00566 681 aaKnown RBP17.71■□□□□ 0.43
USB1-210ENST00000565151 SLC34A2O95436 690 aa17.71■□□□□ 0.43
USB1-210ENST00000565151 SGPL1O95470 568 aa17.71■□□□□ 0.43
USB1-210ENST00000565151 UBXN2AP68543 259 aa17.71■□□□□ 0.43
USB1-210ENST00000565151 U2AF1L4Q8WU68 220 aaKnown RBP17.71■□□□□ 0.43
USB1-210ENST00000565151 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
USB1-210ENST00000565151 SPDYE16A6NNV3 312 aaPredicted RBP17.7■□□□□ 0.42
USB1-210ENST00000565151 RNF113AO15541 343 aaKnown RBP17.7■□□□□ 0.42
USB1-210ENST00000565151 CYP2B6P20813 491 aa17.7■□□□□ 0.42
USB1-210ENST00000565151 USP14P54578 494 aa17.7■□□□□ 0.42
USB1-210ENST00000565151 MORN1Q5T089 497 aa17.7■□□□□ 0.42
USB1-210ENST00000565151 TMEM179Q6ZVK1 233 aa17.7■□□□□ 0.42
USB1-210ENST00000565151 APPBP2Q92624 585 aa17.7■□□□□ 0.42
USB1-210ENST00000565151 CRISPLD2Q9H0B8 497 aa17.7■□□□□ 0.42
USB1-210ENST00000565151 PLXNA1Q9UIW2 1896 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 CCL14Q16627 93 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 ZSCAN25Q6NSZ9 544 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 GPR142Q7Z601 462 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 DEFB118Q96PH6 123 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 RABGAP1Q9Y3P9 1069 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 TTC41PQ6P2S7 1318 aa17.69■□□□□ 0.42
USB1-210ENST00000565151 ZNF236Q9UL36 1845 aa17.68■□□□□ 0.42
USB1-210ENST00000565151 FOXP2O15409 715 aa17.68■□□□□ 0.42
USB1-210ENST00000565151 GPAA1O43292 621 aa17.68■□□□□ 0.42
USB1-210ENST00000565151 MNX1P50219 401 aaPredicted RBP17.68■□□□□ 0.42
USB1-210ENST00000565151 SBK1Q52WX2 424 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms