RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CASP1P29466 404 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 CASP14P31944 242 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 LDHAL6AQ6ZMR3 332 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 NLRP10Q86W26 655 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 CAPZA3Q96KX2 299 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 CEP89Q96ST8 783 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 CNNM1Q9NRU3 951 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
LINC00554-201ENST00000564841 BCL9O00512 1426 aa18.43■□□□□ 0.54
LINC00554-201ENST00000564841 RNF225M0QZC1 329 aaPredicted RBP18.43■□□□□ 0.54
LINC00554-201ENST00000564841 ECM2O94769 699 aaPredicted RBP18.43■□□□□ 0.54
LINC00554-201ENST00000564841 CCDC102BQ68D86 513 aa18.43■□□□□ 0.54
LINC00554-201ENST00000564841 MED4Q9NPJ6 270 aa18.43■□□□□ 0.54
LINC00554-201ENST00000564841 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
LINC00554-201ENST00000564841 ZC3H4Q9UPT8 1303 aaKnown RBP18.43■□□□□ 0.54
LINC00554-201ENST00000564841 POTEB2H3BUK9 544 aa18.43■□□□□ 0.54
LINC00554-201ENST00000564841 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
LINC00554-201ENST00000564841 NR1I3Q14994 352 aa18.43■□□□□ 0.54
LINC00554-201ENST00000564841 KCNG1Q9UIX4 513 aa18.43■□□□□ 0.54
LINC00554-201ENST00000564841 LOC102724428A0A0B4J2F2 783 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 IL15P40933 162 aaPredicted RBP18.42■□□□□ 0.54
LINC00554-201ENST00000564841 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.54
LINC00554-201ENST00000564841 IRAK1P51617 712 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 SIK1P57059 783 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 VPS37DQ86XT2 251 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 PHKBQ93100 1093 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 ITGA6P23229 1130 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 CRKLP46109 303 aaKnown RBP18.42■□□□□ 0.54
LINC00554-201ENST00000564841 METTL24Q5JXM2 366 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 BCAS4Q8TDM0 211 aa18.42■□□□□ 0.54
LINC00554-201ENST00000564841 AGPSO00116 658 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 GLI3P10071 1580 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 ITPK1Q13572 414 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 ZBTB38Q8NAP3 1195 aaPredicted RBP18.41■□□□□ 0.54
LINC00554-201ENST00000564841 NAPGQ99747 312 aaPredicted RBP18.41■□□□□ 0.54
LINC00554-201ENST00000564841 SLF1Q9BQI6 1058 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 TNS2Q63HR2 1409 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 PTPAQ15257 358 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 CPLX2Q6PUV4 134 aaKnown RBP18.41■□□□□ 0.54
LINC00554-201ENST00000564841 SMYD4Q8IYR2 804 aaPredicted RBP18.41■□□□□ 0.54
LINC00554-201ENST00000564841 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 SHANK3Q9BYB0 1731 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 SCP2P22307 547 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 ATP2B2Q01814 1243 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 BRAPQ7Z569 592 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 CD248Q9HCU0 757 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 CAPN7Q9Y6W3 813 aa18.41■□□□□ 0.54
LINC00554-201ENST00000564841 EBAG9O00559 213 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 PPFIBP1Q86W92 1011 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 CCDC24Q8N4L8 307 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 MYL10Q9BUA6 226 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 DONSONQ9NYP3 566 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 SERTAD1Q9UHV2 236 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 MYO6Q9UM54 1294 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 GUCA1BQ9UMX6 200 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 ERVK-24P63145 666 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 STIM1Q13586 685 aa18.4■□□□□ 0.54
LINC00554-201ENST00000564841 PUS7LQ9H0K6 701 aaKnown RBP18.4■□□□□ 0.54
LINC00554-201ENST00000564841 POLR2DO15514 142 aaKnown RBP18.39■□□□□ 0.54
LINC00554-201ENST00000564841 PCCAP05165 728 aaPredicted RBP18.39■□□□□ 0.54
LINC00554-201ENST00000564841 MDM2Q00987 491 aaPredicted RBP18.39■□□□□ 0.54
LINC00554-201ENST00000564841 TTC39AQ5SRH9 613 aa18.39■□□□□ 0.54
LINC00554-201ENST00000564841 RESP18Q5W5W9 173 aa18.39■□□□□ 0.54
LINC00554-201ENST00000564841 USP49Q70CQ1 688 aa18.39■□□□□ 0.54
LINC00554-201ENST00000564841 CCDC82Q8N4S0 544 aa18.39■□□□□ 0.54
LINC00554-201ENST00000564841 CLGNO14967 610 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 PRC1O43663 620 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 ARHGAP25P42331 645 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 ZAP70P43403 619 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 SENP2Q9HC62 589 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 CCT6AP40227 531 aaKnown RBP18.39■□□□□ 0.53
LINC00554-201ENST00000564841 RASGRP2Q7LDG7 609 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 GBP3Q9H0R5 595 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 UBN2Q6ZU65 1347 aa18.39■□□□□ 0.53
LINC00554-201ENST00000564841 RNF113AO15541 343 aaKnown RBP18.38■□□□□ 0.53
LINC00554-201ENST00000564841 INPP5BP32019 993 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 MSL3Q8N5Y2 521 aaKnown RBP18.38■□□□□ 0.53
LINC00554-201ENST00000564841 TTLL11Q8NHH1 800 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 XAGE2Q96GT9 111 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 ALG1Q9BT22 464 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 ACBD3Q9H3P7 528 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 HOOK1Q9UJC3 728 aaKnown RBP18.38■□□□□ 0.53
LINC00554-201ENST00000564841 DISP2A7MBM2 1401 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 LAMA4Q16363 1823 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 KRT40Q6A162 431 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 APTXQ7Z2E3 356 aaKnown RBP18.38■□□□□ 0.53
LINC00554-201ENST00000564841 MAP3K14Q99558 947 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 CCDC87Q9NVE4 849 aa18.38■□□□□ 0.53
LINC00554-201ENST00000564841 GOLGA6CA6NDK9 693 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 FGAP02671 866 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 GYPCP04921 128 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 GOLGA6DP0CG33 693 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 AARSP49588 968 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC00554-201ENST00000564841 POSTNQ15063 836 aa18.37■□□□□ 0.53
LINC00554-201ENST00000564841 CCDC148Q8NFR7 591 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms