RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 GABPAQ06546 454 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 SOGA3Q5TF21 947 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 PNMA1Q8ND90 353 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 POLR3EQ9NVU0 708 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 LETM1O95202 739 aaPredicted RBP29.2■■■□□ 2.26
LINC01003-201ENST00000564834 MMP1P03956 469 aa29.2■■■□□ 2.26
LINC01003-201ENST00000564834 GNL2Q13823 731 aaKnown RBP29.2■■■□□ 2.26
LINC01003-201ENST00000564834 VPS33BQ9H267 617 aa29.2■■■□□ 2.26
LINC01003-201ENST00000564834 KLHL34Q8N239 644 aa29.19■■■□□ 2.26
LINC01003-201ENST00000564834 CNTNAP5Q8WYK1 1306 aa29.19■■■□□ 2.26
LINC01003-201ENST00000564834 BAZ2BQ9UIF8 2168 aaKnown RBP29.19■■■□□ 2.26
LINC01003-201ENST00000564834 PLIN4Q96Q06 1357 aa29.19■■■□□ 2.26
LINC01003-201ENST00000564834 SAFBQ15424 915 aaKnown RBP eCLIP29.18■■■□□ 2.26
LINC01003-201ENST00000564834 YEATS4O95619 227 aa29.18■■■□□ 2.26
LINC01003-201ENST00000564834 PKN1Q16512 942 aa29.18■■■□□ 2.26
LINC01003-201ENST00000564834 PIM2Q9P1W9 311 aa29.18■■■□□ 2.26
LINC01003-201ENST00000564834 MYO3BQ8WXR4 1341 aa29.18■■■□□ 2.26
LINC01003-201ENST00000564834 XBP1P17861 261 aa29.17■■■□□ 2.26
LINC01003-201ENST00000564834 NASPP49321 788 aaPredicted RBP29.17■■■□□ 2.26
LINC01003-201ENST00000564834 BICD2Q8TD16 824 aa29.17■■■□□ 2.26
LINC01003-201ENST00000564834 SWAP70Q9UH65 585 aa29.17■■■□□ 2.26
LINC01003-201ENST00000564834 SERPINB13Q9UIV8 391 aa29.17■■■□□ 2.26
LINC01003-201ENST00000564834 STX8Q9UNK0 236 aa29.17■■■□□ 2.26
LINC01003-201ENST00000564834 LIG1P18858 919 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 RBM5P52756 815 aaKnown RBP eCLIP29.16■■■□□ 2.26
LINC01003-201ENST00000564834 SRBD1Q8N5C6 995 aaKnown RBP29.16■■■□□ 2.26
LINC01003-201ENST00000564834 LINC00301Q8NCQ3 95 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.16■■■□□ 2.26
LINC01003-201ENST00000564834 TAOK2Q9UL54 1235 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 ATF5Q9Y2D1 282 aaPredicted RBP29.16■■■□□ 2.26
LINC01003-201ENST00000564834 HLA-DOAP06340 250 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 NFIAQ12857 509 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 LARGE2Q8N3Y3 721 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 KCNG4Q8TDN1 519 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 TMEM47Q9BQJ4 181 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 IDI2Q9BXS1 227 aa29.16■■■□□ 2.26
LINC01003-201ENST00000564834 V9GY48 417 aaPredicted RBP29.16■■■□□ 2.26
LINC01003-201ENST00000564834 NPM3O75607 178 aaKnown RBP29.15■■■□□ 2.26
LINC01003-201ENST00000564834 GRM4Q14833 912 aa29.15■■■□□ 2.26
LINC01003-201ENST00000564834 FOXP1Q9H334 677 aaPredicted RBP29.15■■■□□ 2.26
LINC01003-201ENST00000564834 CLIC4Q9Y696 253 aa29.15■■■□□ 2.26
LINC01003-201ENST00000564834 NOVP48745 357 aa29.14■■■□□ 2.26
LINC01003-201ENST00000564834 ANO1Q5XXA6 986 aa29.14■■■□□ 2.26
LINC01003-201ENST00000564834 DIS3L2Q8IYB7 885 aaKnown RBP29.14■■■□□ 2.26
LINC01003-201ENST00000564834 EHD4Q9H223 541 aa29.14■■■□□ 2.26
LINC01003-201ENST00000564834 ZNF277Q9NRM2 450 aaPredicted RBP29.14■■■□□ 2.26
LINC01003-201ENST00000564834 KCNJ14Q9UNX9 436 aa29.14■■■□□ 2.26
LINC01003-201ENST00000564834 PCDHAC2Q9Y5I4 1007 aa29.14■■■□□ 2.26
LINC01003-201ENST00000564834 FER1L6Q2WGJ9 1857 aa29.14■■■□□ 2.26
LINC01003-201ENST00000564834 COL4A5P29400 1685 aa29.14■■■□□ 2.25
LINC01003-201ENST00000564834 SIPA1L1O43166 1804 aa29.14■■■□□ 2.25
LINC01003-201ENST00000564834 GNAQP50148 359 aa29.13■■■□□ 2.25
LINC01003-201ENST00000564834 STK38Q15208 465 aa29.13■■■□□ 2.25
LINC01003-201ENST00000564834 NOSTRINQ8IVI9 506 aa29.13■■■□□ 2.25
LINC01003-201ENST00000564834 DDX19AQ9NUU7 478 aaKnown RBP29.13■■■□□ 2.25
LINC01003-201ENST00000564834 ME1P48163 572 aa29.13■■■□□ 2.25
LINC01003-201ENST00000564834 DHX36Q9H2U1 1008 aaKnown RBP29.13■■■□□ 2.25
LINC01003-201ENST00000564834 GREB1LQ9C091 1923 aaPredicted RBP29.12■■■□□ 2.25
LINC01003-201ENST00000564834 RSBN1LQ6PCB5 846 aaPredicted RBP29.12■■■□□ 2.25
LINC01003-201ENST00000564834 CEP95Q96GE4 821 aa29.12■■■□□ 2.25
LINC01003-201ENST00000564834 DACT1Q9NYF0 836 aa29.12■■■□□ 2.25
LINC01003-201ENST00000564834 BTBD18B2RXH4 712 aa29.11■■■□□ 2.25
LINC01003-201ENST00000564834 MAD2L2Q9UI95 211 aa29.11■■■□□ 2.25
LINC01003-201ENST00000564834 SPTLC2O15270 562 aa29.11■■■□□ 2.25
LINC01003-201ENST00000564834 VIL1P09327 827 aaKnown RBP29.11■■■□□ 2.25
LINC01003-201ENST00000564834 TOP1P11387 765 aaKnown RBP29.11■■■□□ 2.25
LINC01003-201ENST00000564834 DALRD3Q5D0E6 543 aaKnown RBP29.11■■■□□ 2.25
LINC01003-201ENST00000564834 PHF20Q9BVI0 1012 aa29.11■■■□□ 2.25
LINC01003-201ENST00000564834 NUP62CLQ9H1M0 184 aa29.11■■■□□ 2.25
LINC01003-201ENST00000564834 TSPY26PQ9H489 355 aa29.11■■■□□ 2.25
LINC01003-201ENST00000564834 VPS54Q9P1Q0 977 aa29.11■■■□□ 2.25
LINC01003-201ENST00000564834 CFAP100Q494V2 611 aa29.1■■■□□ 2.25
LINC01003-201ENST00000564834 ADALQ6DHV7 355 aa29.1■■■□□ 2.25
LINC01003-201ENST00000564834 FAM198AQ9UFP1 575 aa29.1■■■□□ 2.25
LINC01003-201ENST00000564834 PCDHA7Q9UN72 937 aa29.1■■■□□ 2.25
LINC01003-201ENST00000564834 hCG_1642624A0A1W2PR95 340 aa29.09■■■□□ 2.25
LINC01003-201ENST00000564834 SF3A1Q15459 793 aaKnown RBP29.09■■■□□ 2.25
LINC01003-201ENST00000564834 SHISA4Q96DD7 197 aa29.09■■■□□ 2.25
LINC01003-201ENST00000564834 PSMD14O00487 310 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 NR1I2O75469 434 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 SCG2P13521 617 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 SHMT1P34896 483 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 CACNB3P54284 484 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 R3HDM1Q15032 1099 aaKnown RBP29.08■■■□□ 2.25
LINC01003-201ENST00000564834 SLC39A14Q15043 492 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 PFKFB3Q16875 520 aaPredicted RBP29.08■■■□□ 2.25
LINC01003-201ENST00000564834 ILDR2Q71H61 639 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 ZFPM1Q8IX07 1006 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 CCAR1Q8IX12 1150 aaKnown RBP29.08■■■□□ 2.25
LINC01003-201ENST00000564834 STAG2Q8N3U4 1231 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 RBSNQ9H1K0 784 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 IGKV6D-41A0A0C4DH26 115 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 A0A1W2PQ27 194 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 A0A1W2PQ64 194 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 A0A1W2PQD8 194 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 RAD17O75943 681 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 NIM1KQ8IY84 436 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 GMLQ99445 158 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 LZTS2Q9BRK4 669 aa29.08■■■□□ 2.25
LINC01003-201ENST00000564834 PANK2Q9BZ23 570 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms