RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 TBX22Q9Y458 520 aa7.25□□□□□ -1.25
CDH1-207ENST00000564745 RGS13O14921 159 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 BMP3P12645 472 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 CAP2P40123 477 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 PPFIBP1Q86W92 1011 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 KCT2Q8NC54 265 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 PPP1R13LQ8WUF5 828 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 KLHL6Q8WZ60 621 aa7.24□□□□□ -1.25
CDH1-207ENST00000564745 UTP4Q969X6 686 aaKnown RBP7.24□□□□□ -1.25
CDH1-207ENST00000564745 MRPL42Q9Y6G3 142 aaKnown RBP7.24□□□□□ -1.25
CDH1-207ENST00000564745 RASSF7Q02833 373 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 CDK5R2Q13319 367 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 TDRD10Q5VZ19 366 aaKnown RBP7.23□□□□□ -1.25
CDH1-207ENST00000564745 VHLLQ6RSH7 139 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 TXNRD3Q86VQ6 643 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 TMEM151AQ8N4L1 468 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 CYB5D2Q8WUJ1 264 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 ZNF512BQ96KM6 892 aaPredicted RBP7.23□□□□□ -1.25
CDH1-207ENST00000564745 MYRFLQ96LU7 910 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 CCDC74BQ96LY2 380 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 SLC6A18Q96N87 628 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 DNAJC7Q99615 494 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 CCDC113Q9H0I3 377 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 KANSL2Q9H9L4 492 aa7.23□□□□□ -1.25
CDH1-207ENST00000564745 ZNF214Q9UL59 606 aaPredicted RBP7.23□□□□□ -1.25
CDH1-207ENST00000564745 CADPSQ9ULU8 1353 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 TLDC2A0PJX2 215 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 C9IYK1 514 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 PDPK1O15530 556 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 LRIG2O94898 1065 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 GDF11O95390 407 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 MAP4P27816 1152 aaKnown RBP7.22□□□□□ -1.25
CDH1-207ENST00000564745 RXRBP28702 533 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 GBP1P32455 592 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 KIAA1211LQ6NV74 962 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 SEZ6L2Q6UXD5 910 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 CD163Q86VB7 1156 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 LILRB2Q8N423 598 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 EZH1Q92800 747 aaPredicted RBP7.22□□□□□ -1.25
CDH1-207ENST00000564745 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 MIPEPQ99797 713 aa7.22□□□□□ -1.25
CDH1-207ENST00000564745 PHAXQ9H814 394 aaKnown RBP7.22□□□□□ -1.25
CDH1-207ENST00000564745 C1QTNF9BB2RNN3 333 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 SLITRK5O94991 958 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 TP53P04637 393 aaPredicted RBP7.21□□□□□ -1.26
CDH1-207ENST00000564745 SPATC1Q76KD6 591 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 CDH24Q86UP0 819 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 FAM20CQ8IXL6 584 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 DNAJB8Q8NHS0 232 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 DCAF5Q96JK2 942 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 SSBP4Q9BWG4 385 aaPredicted RBP7.21□□□□□ -1.26
CDH1-207ENST00000564745 C1GALT1Q9NS00 363 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 SLC12A7Q9Y666 1083 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 COL17A1Q9UMD9 1497 aaPredicted RBP7.21□□□□□ -1.26
CDH1-207ENST00000564745 CNTNAP4Q9C0A0 1308 aa7.21□□□□□ -1.26
CDH1-207ENST00000564745 DIAPH1O60610 1272 aaKnown RBP7.2□□□□□ -1.26
CDH1-207ENST00000564745 SLC7A5Q01650 507 aa7.2□□□□□ -1.26
CDH1-207ENST00000564745 RASGRF1Q13972 1273 aa7.2□□□□□ -1.26
CDH1-207ENST00000564745 LETMD1Q6P1Q0 360 aa7.2□□□□□ -1.26
CDH1-207ENST00000564745 LRP10Q7Z4F1 713 aa7.2□□□□□ -1.26
CDH1-207ENST00000564745 RNPC3Q96LT9 517 aaKnown RBP7.2□□□□□ -1.26
CDH1-207ENST00000564745 KCNF1Q9H3M0 494 aa7.2□□□□□ -1.26
CDH1-207ENST00000564745 SUCOQ9UBS9 1254 aaKnown RBP7.2□□□□□ -1.26
CDH1-207ENST00000564745 PFDN2Q9UHV9 154 aa7.2□□□□□ -1.26
CDH1-207ENST00000564745 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
CDH1-207ENST00000564745 FAM95CA0A1B0GW59 222 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 CLEC3AO75596 197 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 LEFTY1O75610 366 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 CCNFP41002 786 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 PMS1P54277 932 aaKnown RBP7.19□□□□□ -1.26
CDH1-207ENST00000564745 NFKBIBQ15653 356 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 UVSSAQ2YD98 709 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 AXDND1Q5T1B0 1012 aaPredicted RBP7.19□□□□□ -1.26
CDH1-207ENST00000564745 SDE2Q6IQ49 451 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 SHISA5Q8N114 240 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 MFSD2AQ8NA29 543 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 PRDM10Q9NQV6 1147 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 CEP131Q9UPN4 1083 aa7.19□□□□□ -1.26
CDH1-207ENST00000564745 MAP7Q14244 749 aa7.18□□□□□ -1.26
CDH1-207ENST00000564745 NCAPHQ15003 741 aa7.18□□□□□ -1.26
CDH1-207ENST00000564745 DCAF15Q66K64 600 aa7.18□□□□□ -1.26
CDH1-207ENST00000564745 BEND4Q6ZU67 534 aa7.18□□□□□ -1.26
CDH1-207ENST00000564745 ALYREFQ86V81 257 aaKnown RBP7.18□□□□□ -1.26
CDH1-207ENST00000564745 TOP6BLQ8N6T0 577 aa7.18□□□□□ -1.26
CDH1-207ENST00000564745 YIPF2Q9BWQ6 316 aa7.18□□□□□ -1.26
CDH1-207ENST00000564745 SUSD2Q9UGT4 822 aa7.18□□□□□ -1.26
CDH1-207ENST00000564745 SUSD5O60279 629 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 ADMP35318 185 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 MTERF2Q49AM1 385 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 ZNF662Q6ZS27 426 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 VWCEQ96DN2 955 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 DHRS1Q96LJ7 313 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 KREMEN1Q96MU8 473 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 DUSP23Q9BVJ7 150 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 LGR4Q9BXB1 951 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 ZMYM5Q9UJ78 669 aa7.17□□□□□ -1.26
CDH1-207ENST00000564745 HMX2A2RU54 273 aa7.16□□□□□ -1.26
CDH1-207ENST00000564745 CBFA2T2O43439 604 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms