RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 PCMTD2Q9NV79 361 aa7.08□□□□□ -1.28
CHD9-210ENST00000564582 AQRO60306 1485 aaKnown RBP eCLIP7.08□□□□□ -1.28
CHD9-210ENST00000564582 FMN1Q68DA7 1419 aa7.08□□□□□ -1.28
CHD9-210ENST00000564582 PRR36Q9H6K5 1346 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 ARHGAP35Q9NRY4 1499 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 TLR3O15455 904 aaKnown RBP7.07□□□□□ -1.28
CHD9-210ENST00000564582 CST3P01034 146 aaPredicted RBP7.07□□□□□ -1.28
CHD9-210ENST00000564582 SSTR4P31391 388 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 CD97P48960 835 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 YARSP54577 528 aaKnown RBP7.07□□□□□ -1.28
CHD9-210ENST00000564582 ZNF394Q53GI3 561 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 UBE3DQ7Z6J8 389 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 MCATQ8IVS2 390 aaKnown RBP7.07□□□□□ -1.28
CHD9-210ENST00000564582 SHISA5Q8N114 240 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.07□□□□□ -1.28
CHD9-210ENST00000564582 TJP2Q9UDY2 1190 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 DDX41Q9UJV9 622 aaKnown RBP7.07□□□□□ -1.28
CHD9-210ENST00000564582 NCOA1Q15788 1441 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 AKNAQ7Z591 1439 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 MIA2Q96PC5 1412 aa7.07□□□□□ -1.28
CHD9-210ENST00000564582 BIVM-ERCC5R4GMW8 1640 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 GRIN3BO60391 1043 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 LEFTY1O75610 366 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 HDLBPQ00341 1268 aaKnown RBP7.06□□□□□ -1.28
CHD9-210ENST00000564582 RALBP1Q15311 655 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 NKG7Q16617 165 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 TMEM201Q5SNT2 666 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 ARTNQ5T4W7 220 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 FAM13CQ8NE31 585 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 FBXO27Q8NI29 283 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 NKD1Q969G9 470 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 SIN3AQ96ST3 1273 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 MIPEPQ99797 713 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 ZFP64Q9NPA5 681 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 PCDHGB7Q9Y5F8 929 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 CORINQ9Y5Q5 1042 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 ZMYM3Q14202 1370 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 CCDC7Q96M83 1385 aa7.06□□□□□ -1.28
CHD9-210ENST00000564582 ABCA5Q8WWZ7 1642 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 HTR3BO95264 441 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 ZNF165P49910 485 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 IRX6P78412 446 aaPredicted RBP7.05□□□□□ -1.28
CHD9-210ENST00000564582 CALD1Q05682 793 aaKnown RBP7.05□□□□□ -1.28
CHD9-210ENST00000564582 SEZ6Q53EL9 994 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 LETMD1Q6P1Q0 360 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 METTL16Q86W50 562 aaKnown RBP7.05□□□□□ -1.28
CHD9-210ENST00000564582 NT5DC4Q86YG4 428 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 FAM9BQ8IZU0 186 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 ACSF2Q96CM8 615 aaPredicted RBP7.05□□□□□ -1.28
CHD9-210ENST00000564582 COX4I2Q96KJ9 171 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 SPATA32Q96LK8 384 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 MKNK2Q9HBH9 465 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 PRDM5Q9NQX1 630 aaPredicted RBP7.05□□□□□ -1.28
CHD9-210ENST00000564582 UBP1Q9NZI7 540 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 REV1Q9UBZ9 1251 aa7.05□□□□□ -1.28
CHD9-210ENST00000564582 TPX2Q9ULW0 747 aaKnown RBP7.05□□□□□ -1.28
CHD9-210ENST00000564582 POLR3KQ9Y2Y1 108 aaPredicted RBP7.05□□□□□ -1.28
CHD9-210ENST00000564582 GNAT3A8MTJ3 354 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 KIAA1324LA8MWY0 1029 aaPredicted RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 E9PSI1 815 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 IGF2BP3O00425 579 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHD9-210ENST00000564582 HYAL3O43820 417 aaPredicted RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 CYP7A1P22680 504 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 MCM4P33991 863 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 ETV3P41162 512 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 CRKP46108 304 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 RRP1P56182 461 aaKnown RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 CENPQQ7L2Z9 268 aaPredicted RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 REXO1Q8N1G1 1221 aaKnown RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 XAGE3Q8WTP9 111 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 FRAT1Q92837 279 aaPredicted RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 BSDC1Q9NW68 430 aaPredicted RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 KLHL3Q9UH77 587 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 MAPK8IP1Q9UQF2 711 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 PCDHB14Q9Y5E9 798 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 BRD4O60885 1362 aaPredicted RBP7.04□□□□□ -1.28
CHD9-210ENST00000564582 PLEKHH2Q8IVE3 1493 aa7.04□□□□□ -1.28
CHD9-210ENST00000564582 SLITRK5O94991 958 aa7.03□□□□□ -1.28
CHD9-210ENST00000564582 HSPA5P11021 654 aaKnown RBP7.03□□□□□ -1.28
CHD9-210ENST00000564582 TCF3P15923 654 aa7.03□□□□□ -1.28
CHD9-210ENST00000564582 RACK1P63244 317 aaKnown RBP7.03□□□□□ -1.28
CHD9-210ENST00000564582 FAM50AQ14320 339 aaKnown RBP7.03□□□□□ -1.28
CHD9-210ENST00000564582 DTX1Q86Y01 620 aa7.03□□□□□ -1.28
CHD9-210ENST00000564582 SLITRK4Q8IW52 837 aa7.03□□□□□ -1.28
CHD9-210ENST00000564582 SLFN12Q8IYM2 578 aa7.03□□□□□ -1.28
CHD9-210ENST00000564582 NETO1Q8TDF5 533 aa7.03□□□□□ -1.28
CHD9-210ENST00000564582 ZNF428Q96B54 188 aa7.03□□□□□ -1.28
CHD9-210ENST00000564582 EAF1Q96JC9 268 aaPredicted RBP7.03□□□□□ -1.28
CHD9-210ENST00000564582 DPH2Q9BQC3 489 aaPredicted RBP7.03□□□□□ -1.28
CHD9-210ENST00000564582 ANGEL1Q9UNK9 670 aaKnown RBP7.03□□□□□ -1.28
CHD9-210ENST00000564582 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.03□□□□□ -1.28
CHD9-210ENST00000564582 CUX1P39880 1505 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 ATE1O95260 518 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 CEACAM5P06731 702 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 SPINK2P20155 84 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms