RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CCL15Q16663 113 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 C16orf86Q6ZW13 317 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 BRI3BPQ8WY22 251 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 ESR2Q92731 530 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 DYNLL2Q96FJ2 89 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 ZSWIM6Q9HCJ5 1215 aa19.99■□□□□ 0.79
CMTM3-208ENST00000564247 ROBO3Q96MS0 1386 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 GPR25O00155 361 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 RANBP6O60518 1105 aaKnown RBP19.98■□□□□ 0.79
CMTM3-208ENST00000564247 MCM5P33992 734 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 NEK4P51957 841 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 SNAPC2Q13487 334 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 RUFY3Q7L099 469 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 DHX32Q7L7V1 743 aaKnown RBP19.98■□□□□ 0.79
CMTM3-208ENST00000564247 ZNF296Q8WUU4 475 aaPredicted RBP19.98■□□□□ 0.79
CMTM3-208ENST00000564247 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 INCENPQ9NQS7 918 aa19.98■□□□□ 0.79
CMTM3-208ENST00000564247 DOCK1Q14185 1865 aa19.97■□□□□ 0.79
CMTM3-208ENST00000564247 SMIM22K7EJ46 135 aa19.97■□□□□ 0.79
CMTM3-208ENST00000564247 ST18O60284 1047 aa19.97■□□□□ 0.79
CMTM3-208ENST00000564247 CETPP11597 493 aa19.97■□□□□ 0.79
CMTM3-208ENST00000564247 DGKZQ13574 1117 aa19.97■□□□□ 0.79
CMTM3-208ENST00000564247 SCYL3Q8IZE3 742 aa19.97■□□□□ 0.79
CMTM3-208ENST00000564247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.97■□□□□ 0.79
CMTM3-208ENST00000564247 HERC5Q9UII4 1024 aaKnown RBP19.97■□□□□ 0.79
CMTM3-208ENST00000564247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.97■□□□□ 0.79
CMTM3-208ENST00000564247 DDX60LQ5H9U9 1706 aaKnown RBP19.96■□□□□ 0.79
CMTM3-208ENST00000564247 B4E1Z4 1266 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 CTNND1O60716 968 aaKnown RBP19.96■□□□□ 0.79
CMTM3-208ENST00000564247 PRDM1O75626 825 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 SLURP2P0DP57 97 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 RPS6KB1P23443 525 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 EVX2Q03828 476 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 GABPAQ06546 454 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 METTL16Q86W50 562 aaKnown RBP19.96■□□□□ 0.79
CMTM3-208ENST00000564247 ABHD8Q96I13 439 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 UPF3BQ9BZI7 483 aaKnown RBP19.96■□□□□ 0.79
CMTM3-208ENST00000564247 MCOLN1Q9GZU1 580 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 PDRG1Q9NUG6 133 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 KCNH4Q9UQ05 1017 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
CMTM3-208ENST00000564247 SIPA1L1O43166 1804 aa19.96■□□□□ 0.79
CMTM3-208ENST00000564247 KDM4AO75164 1064 aa19.95■□□□□ 0.78
CMTM3-208ENST00000564247 FGD1P98174 961 aa19.95■□□□□ 0.78
CMTM3-208ENST00000564247 CRHR2Q13324 411 aa19.95■□□□□ 0.78
CMTM3-208ENST00000564247 MB21D2Q8IYB1 491 aaPredicted RBP19.95■□□□□ 0.78
CMTM3-208ENST00000564247 ZCCHC17Q9NP64 241 aaKnown RBP19.95■□□□□ 0.78
CMTM3-208ENST00000564247 PICK1Q9NRD5 415 aa19.95■□□□□ 0.78
CMTM3-208ENST00000564247 ZSWIM5Q9P217 1185 aa19.95■□□□□ 0.78
CMTM3-208ENST00000564247 TACC3Q9Y6A5 838 aa19.95■□□□□ 0.78
CMTM3-208ENST00000564247 NEDD4P46934 1319 aa19.95■□□□□ 0.78
CMTM3-208ENST00000564247 TSPY2A6NKD2 308 aa19.94■□□□□ 0.78
CMTM3-208ENST00000564247 FKTNO75072 461 aa19.94■□□□□ 0.78
CMTM3-208ENST00000564247 ANP32AP39687 249 aaKnown RBP19.94■□□□□ 0.78
CMTM3-208ENST00000564247 SART3Q15020 963 aaKnown RBP19.94■□□□□ 0.78
CMTM3-208ENST00000564247 CTU1Q7Z7A3 348 aaKnown RBP19.94■□□□□ 0.78
CMTM3-208ENST00000564247 IQCA1Q86XH1 822 aa19.94■□□□□ 0.78
CMTM3-208ENST00000564247 SLC44A5Q8NCS7 719 aa19.94■□□□□ 0.78
CMTM3-208ENST00000564247 CCDC17Q96LX7 622 aa19.94■□□□□ 0.78
CMTM3-208ENST00000564247 PHIPQ8WWQ0 1821 aa19.94■□□□□ 0.78
CMTM3-208ENST00000564247 ATAD5Q96QE3 1844 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 ERICH2A1L162 156 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 PRC1O43663 620 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 CAPN15O75808 1086 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 TSPY3P0CV98 308 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 TSPY8P0CW00 308 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 CPA1P15085 419 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 PTPRAP18433 802 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 TFAP4Q01664 338 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 EXOSC10Q01780 885 aaKnown RBP19.93■□□□□ 0.78
CMTM3-208ENST00000564247 ANKRD1Q15327 319 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 CERKLQ49MI3 558 aaPredicted RBP19.93■□□□□ 0.78
CMTM3-208ENST00000564247 CCDC178Q5BJE1 867 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 FAM43AQ8N2R8 423 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 WDR19Q8NEZ3 1342 aa19.93■□□□□ 0.78
CMTM3-208ENST00000564247 FAM196BA6NMK8 535 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 CXCL11O14625 94 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 RASA1P20936 1047 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 SHMT1P34896 483 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 FAM47AQ5JRC9 791 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 TATDN1Q6P1N9 297 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 CYB5R4Q7L1T6 521 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 TMEM87BQ96K49 555 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 UBAC1Q9BSL1 405 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 MTA3Q9BTC8 594 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 ALDH8A1Q9H2A2 487 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-208ENST00000564247 ZFYVE28Q9HCC9 887 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 ZHX2Q9Y6X8 837 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 PTPRFP10586 1907 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 MYH8P13535 1937 aa19.92■□□□□ 0.78
CMTM3-208ENST00000564247 BTBD19C9JJ37 291 aa19.91■□□□□ 0.78
CMTM3-208ENST00000564247 IFIT3O14879 490 aaKnown RBP19.91■□□□□ 0.78
CMTM3-208ENST00000564247 MCM2P49736 904 aa19.91■□□□□ 0.78
CMTM3-208ENST00000564247 TAF1CQ15572 869 aaPredicted RBP19.91■□□□□ 0.78
CMTM3-208ENST00000564247 CHST3Q7LGC8 479 aa19.91■□□□□ 0.78
CMTM3-208ENST00000564247 CABP5Q9NP86 173 aa19.91■□□□□ 0.78
CMTM3-208ENST00000564247 AFG3L2Q9Y4W6 797 aa19.91■□□□□ 0.78
CMTM3-208ENST00000564247 MPHOSPH10O00566 681 aaKnown RBP19.9■□□□□ 0.78
CMTM3-208ENST00000564247 MOGSQ13724 837 aa19.9■□□□□ 0.78
CMTM3-208ENST00000564247 Q6ZUG5 572 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms