RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 MAOBP27338 520 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 GJA8P48165 433 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 NLRP12P59046 1061 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 ARID5AQ03989 594 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 SEPT6Q14141 434 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 GALNT11Q8NCW6 608 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 EAF1Q96JC9 268 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 TANGO6Q9C0B7 1094 aa8.58□□□□□ -1.04
HERPUD1-208ENST00000563911 SPHKAPQ2M3C7 1700 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 SPATA31A3Q5VYP0 1347 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 GREM1O60565 184 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 GARTP22102 1010 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 CD68P34810 354 aaPredicted RBP8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 SNRPNP63162 240 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 ZNF252P-AS1Q0IIN9 211 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 BNC2Q6ZN30 1099 aaPredicted RBP8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 PDZD3Q86UT5 571 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 DTWD1Q8N5C7 304 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 NT5C1AQ9BXI3 368 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 USP26Q9BXU7 913 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 KCNQ5Q9NR82 932 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 UBP1Q9NZI7 540 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 PRKAG2Q9UGJ0 569 aa8.57□□□□□ -1.04
HERPUD1-208ENST00000563911 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 FAM83GA6ND36 823 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 DDX3YO15523 660 aaKnown RBP8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 DEAF1O75398 565 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 ECEL1O95672 775 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 F13A1P00488 732 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 RAC1P63000 192 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 APOBRQ0VD83 1088 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 R3HDM1Q15032 1099 aaKnown RBP8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 VPS72Q15906 364 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 MPRIPQ6WCQ1 1025 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 KRT27Q7Z3Y8 459 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 CCDC84Q86UT8 332 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.56□□□□□ -1.04
HERPUD1-208ENST00000563911 ADGRF5Q8IZF2 1346 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 NAIPQ13075 1403 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 TRIM37O94972 964 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 LINC00114Q6XXX2 140 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 FAM196AQ6ZSG2 479 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 KRT28Q7Z3Y7 464 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 DCAF11Q8TEB1 546 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 GATAD2BQ8WXI9 593 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 ACSBG1Q96GR2 724 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 SPATA32Q96LK8 384 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 NRSN2Q9GZP1 204 aa8.55□□□□□ -1.04
HERPUD1-208ENST00000563911 HFM1A2PYH4 1435 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 PIK3R2O00459 728 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 ATF4P18848 351 aaPredicted RBP8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 SCARA3Q6AZY7 606 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 TMEM132EQ6IEE7 984 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 FBXO11Q86XK2 927 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 RASGRP4Q8TDF6 673 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 NKD1Q969G9 470 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 GMLQ99445 158 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 CCDC86Q9H6F5 360 aaKnown RBP8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 STK26Q9P289 416 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
HERPUD1-208ENST00000563911 CDC42BPGQ6DT37 1551 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 SPDYE3A6NKU9 549 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 GNB5O14775 395 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 TM4SF5O14894 197 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 BPNT1O95861 308 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 TRIM28Q13263 835 aaKnown RBP8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 EZH2Q15910 746 aaKnown RBP8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 FMR1NBQ8N0W7 255 aaPredicted RBP8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 FBXO27Q8NI29 283 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 GPBAR1Q8TDU6 330 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 GAL3ST3Q96A11 431 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.53□□□□□ -1.044e-9■■■□□ 14.9
HERPUD1-208ENST00000563911 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 PCDHA4Q9UN74 947 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 EFR3BQ9Y2G0 817 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 USP32Q8NFA0 1604 aa8.53□□□□□ -1.04
HERPUD1-208ENST00000563911 LOC100289279A0A1B0GTE1 492 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 FAM221AA4D161 298 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 WIPF1O43516 503 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 ADAM11O75078 769 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 CTSBP07858 339 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 CRKP46108 304 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 SEZ6Q53EL9 994 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 HP1BP3Q5SSJ5 553 aaPredicted RBP8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 SEC16BQ96JE7 1060 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 KRT82Q9NSB4 513 aa8.52□□□□□ -1.05
HERPUD1-208ENST00000563911 GINM1Q9NU53 330 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms