RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SLC17A8Q8NDX2 589 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 EAF2Q96CJ1 260 aaPredicted RBP22.78■■□□□ 1.24
NME3-204ENST00000563498 TLR7Q9NYK1 1049 aaKnown RBP22.78■■□□□ 1.24
NME3-204ENST00000563498 MYH1P12882 1939 aa22.78■■□□□ 1.24
NME3-204ENST00000563498 GLRX3O76003 335 aaKnown RBP22.77■■□□□ 1.24
NME3-204ENST00000563498 SYN1P17600 705 aa22.77■■□□□ 1.24
NME3-204ENST00000563498 USP5P45974 858 aa22.77■■□□□ 1.24
NME3-204ENST00000563498 CCL14Q16627 93 aa22.77■■□□□ 1.24
NME3-204ENST00000563498 TDHQ8IZJ6 230 aa22.77■■□□□ 1.24
NME3-204ENST00000563498 MIGA1Q8NAN2 632 aa22.77■■□□□ 1.24
NME3-204ENST00000563498 FEZ1Q99689 392 aa22.77■■□□□ 1.24
NME3-204ENST00000563498 KIAA1683Q9H0B3 1180 aa22.77■■□□□ 1.24
NME3-204ENST00000563498 CCDC8Q9H0W5 538 aaPredicted RBP22.77■■□□□ 1.24
NME3-204ENST00000563498 CCND3P30281 292 aaPredicted RBP22.76■■□□□ 1.23
NME3-204ENST00000563498 MAP2K5Q13163 448 aa22.76■■□□□ 1.23
NME3-204ENST00000563498 LBX2Q6XYB7 198 aa22.76■■□□□ 1.23
NME3-204ENST00000563498 TTC6Q86TZ1 520 aa22.76■■□□□ 1.23
NME3-204ENST00000563498 MAGEB6Q8N7X4 407 aa22.76■■□□□ 1.23
NME3-204ENST00000563498 C1orf115Q9H7X2 142 aa22.76■■□□□ 1.23
NME3-204ENST00000563498 CNMDO75829 334 aa22.75■■□□□ 1.23
NME3-204ENST00000563498 MAP3K12Q12852 859 aa22.75■■□□□ 1.23
NME3-204ENST00000563498 CERKLQ49MI3 558 aaPredicted RBP22.75■■□□□ 1.23
NME3-204ENST00000563498 CATSPERGQ6ZRH7 1159 aa22.75■■□□□ 1.23
NME3-204ENST00000563498 FTSJ3Q8IY81 847 aaKnown RBP22.75■■□□□ 1.23
NME3-204ENST00000563498 EDC3Q96F86 508 aaKnown RBP22.75■■□□□ 1.23
NME3-204ENST00000563498 CWC22Q9HCG8 908 aaKnown RBP22.75■■□□□ 1.23
NME3-204ENST00000563498 RAB3GAP1Q15042 981 aa22.74■■□□□ 1.23
NME3-204ENST00000563498 ABCB5Q2M3G0 1257 aa22.74■■□□□ 1.23
NME3-204ENST00000563498 SLC15A5A6NIM6 579 aa22.73■■□□□ 1.23
NME3-204ENST00000563498 VCAM1P19320 739 aa22.73■■□□□ 1.23
NME3-204ENST00000563498 ZYXQ15942 572 aaKnown RBP22.73■■□□□ 1.23
NME3-204ENST00000563498 MFSD14CQ5VZR4 134 aa22.73■■□□□ 1.23
NME3-204ENST00000563498 ITPRIPQ8IWB1 547 aa22.73■■□□□ 1.23
NME3-204ENST00000563498 UBE2OQ9C0C9 1292 aaKnown RBP22.73■■□□□ 1.23
NME3-204ENST00000563498 CABP5Q9NP86 173 aa22.73■■□□□ 1.23
NME3-204ENST00000563498 COL6A3P12111 3177 aa22.73■■□□□ 1.23
NME3-204ENST00000563498 HOXC6P09630 235 aa22.72■■□□□ 1.23
NME3-204ENST00000563498 PTPREP23469 700 aa22.72■■□□□ 1.23
NME3-204ENST00000563498 DEFB123Q8N688 67 aa22.72■■□□□ 1.23
NME3-204ENST00000563498 ANTXR1Q9H6X2 564 aa22.72■■□□□ 1.23
NME3-204ENST00000563498 DLL1O00548 723 aa22.71■■□□□ 1.23
NME3-204ENST00000563498 SHMT1P34896 483 aa22.71■■□□□ 1.23
NME3-204ENST00000563498 LRRC26Q2I0M4 334 aa22.71■■□□□ 1.23
NME3-204ENST00000563498 ERC1Q8IUD2 1116 aa22.71■■□□□ 1.23
NME3-204ENST00000563498 ACER1Q8TDN7 264 aa22.71■■□□□ 1.23
NME3-204ENST00000563498 RIOK1Q9BRS2 568 aaKnown RBP22.71■■□□□ 1.23
NME3-204ENST00000563498 NDUFB9Q9Y6M9 179 aa22.71■■□□□ 1.23
NME3-204ENST00000563498 FRMPD3Q5JV73 1810 aa22.71■■□□□ 1.23
NME3-204ENST00000563498 MSCO60682 206 aa22.7■■□□□ 1.22
NME3-204ENST00000563498 PLCD1P51178 756 aa22.7■■□□□ 1.22
NME3-204ENST00000563498 GRB14Q14449 540 aa22.7■■□□□ 1.22
NME3-204ENST00000563498 FLRT1Q9NZU1 646 aa22.7■■□□□ 1.22
NME3-204ENST00000563498 BTBD7Q9P203 1132 aa22.7■■□□□ 1.22
NME3-204ENST00000563498 IVNS1ABPQ9Y6Y0 642 aa22.7■■□□□ 1.22
NME3-204ENST00000563498 SPDYE16A6NNV3 312 aaPredicted RBP22.69■■□□□ 1.22
NME3-204ENST00000563498 RLBP1P12271 317 aa22.69■■□□□ 1.22
NME3-204ENST00000563498 GABPAQ06546 454 aa22.69■■□□□ 1.22
NME3-204ENST00000563498 WDR78Q5VTH9 848 aa22.69■■□□□ 1.22
NME3-204ENST00000563498 CEP85Q6P2H3 762 aa22.69■■□□□ 1.22
NME3-204ENST00000563498 AACSQ86V21 672 aa22.69■■□□□ 1.22
NME3-204ENST00000563498 RPAP3Q9H6T3 665 aaPredicted RBP22.69■■□□□ 1.22
NME3-204ENST00000563498 DDX20Q9UHI6 824 aaKnown RBP22.69■■□□□ 1.22
NME3-204ENST00000563498 GUCY1A2P33402 732 aa22.68■■□□□ 1.22
NME3-204ENST00000563498 ATP2B2Q01814 1243 aa22.68■■□□□ 1.22
NME3-204ENST00000563498 TTF1Q15361 905 aaPredicted RBP22.68■■□□□ 1.22
NME3-204ENST00000563498 LPAR1Q92633 364 aa22.68■■□□□ 1.22
NME3-204ENST00000563498 STXBP5LQ9Y2K9 1186 aa22.68■■□□□ 1.22
NME3-204ENST00000563498 MAGEB6P1A0A0J9YX57 407 aa22.67■■□□□ 1.22
NME3-204ENST00000563498 IGHA2P01877 340 aa22.67■■□□□ 1.22
NME3-204ENST00000563498 MTMR10Q9NXD2 777 aa22.67■■□□□ 1.22
NME3-204ENST00000563498 POLR3DP05423 398 aaPredicted RBP22.66■■□□□ 1.22
NME3-204ENST00000563498 HSP90AB4PQ58FF6 505 aa22.66■■□□□ 1.22
NME3-204ENST00000563498 Q7L0L9 218 aa22.66■■□□□ 1.22
NME3-204ENST00000563498 CRNKL1Q9BZJ0 848 aaKnown RBP22.66■■□□□ 1.22
NME3-204ENST00000563498 HOXC10Q9NYD6 342 aa22.66■■□□□ 1.22
NME3-204ENST00000563498 EXOC6BQ9Y2D4 811 aa22.66■■□□□ 1.22
NME3-204ENST00000563498 NAV1Q8NEY1 1877 aa22.66■■□□□ 1.22
NME3-204ENST00000563498 ZNF236Q9UL36 1845 aa22.66■■□□□ 1.22
NME3-204ENST00000563498 DNM1LO00429 736 aa22.65■■□□□ 1.22
NME3-204ENST00000563498 STRNO43815 780 aa22.65■■□□□ 1.22
NME3-204ENST00000563498 COG2Q14746 738 aa22.65■■□□□ 1.22
NME3-204ENST00000563498 SEPT2Q15019 361 aa22.65■■□□□ 1.22
NME3-204ENST00000563498 NPLOC4Q8TAT6 608 aa22.65■■□□□ 1.22
NME3-204ENST00000563498 SENP6Q9GZR1 1112 aaPredicted RBP22.65■■□□□ 1.22
NME3-204ENST00000563498 PDE6AP16499 860 aa22.64■■□□□ 1.21
NME3-204ENST00000563498 MDM2Q00987 491 aaPredicted RBP22.64■■□□□ 1.21
NME3-204ENST00000563498 SLC9C2Q5TAH2 1124 aa22.64■■□□□ 1.21
NME3-204ENST00000563498 OLFML2BQ68BL8 750 aa22.64■■□□□ 1.21
NME3-204ENST00000563498 SHCBP1Q8NEM2 672 aa22.64■■□□□ 1.21
NME3-204ENST00000563498 A0A1W2PRG0 241 aa22.63■■□□□ 1.21
NME3-204ENST00000563498 CYBAP13498 195 aa22.63■■□□□ 1.21
NME3-204ENST00000563498 CNGA1P29973 690 aa22.63■■□□□ 1.21
NME3-204ENST00000563498 CYP2C19P33261 490 aa22.63■■□□□ 1.21
NME3-204ENST00000563498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.63■■□□□ 1.21
NME3-204ENST00000563498 MOV10L1Q9BXT6 1211 aaKnown RBP22.63■■□□□ 1.21
NME3-204ENST00000563498 MCM9Q9NXL9 1143 aa22.63■■□□□ 1.21
NME3-204ENST00000563498 A0A0G2JMZ2 1700 aa22.62■■□□□ 1.21
NME3-204ENST00000563498 DPP9Q86TI2 863 aa22.62■■□□□ 1.21
NME3-204ENST00000563498 MB21D1Q8N884 522 aa22.62■■□□□ 1.21
NME3-204ENST00000563498 TRPV1Q8NER1 839 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms