RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 A0A1W2PRG0 241 aa25.41■■□□□ 1.66
GGA2-205ENST00000563494 POLR3DP05423 398 aaPredicted RBP25.41■■□□□ 1.66
GGA2-205ENST00000563494 CYP2D6P10635 497 aa25.41■■□□□ 1.66
GGA2-205ENST00000563494 LBX2Q6XYB7 198 aa25.41■■□□□ 1.66
GGA2-205ENST00000563494 CATSPERGQ6ZRH7 1159 aa25.41■■□□□ 1.66
GGA2-205ENST00000563494 GPRC5AQ8NFJ5 357 aa25.41■■□□□ 1.66
GGA2-205ENST00000563494 BAZ2AQ9UIF9 1905 aaKnown RBP25.41■■□□□ 1.66
GGA2-205ENST00000563494 RLFQ13129 1914 aa25.4■■□□□ 1.66
GGA2-205ENST00000563494 RAB3GAP1Q15042 981 aa25.4■■□□□ 1.66
GGA2-205ENST00000563494 PORCNQ9H237 461 aa25.4■■□□□ 1.66
GGA2-205ENST00000563494 ATP8A2Q9NTI2 1148 aa25.4■■□□□ 1.66
GGA2-205ENST00000563494 RANBP2P49792 3224 aaKnown RBP25.4■■□□□ 1.66
GGA2-205ENST00000563494 MBD4O95243 580 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 VCAM1P19320 739 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 USP14P54578 494 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 ERVK-9P63128 1117 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 ERVK-24P63145 666 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 SEPT2Q15019 361 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 SLC44A5Q8NCS7 719 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 PUS7LQ9H0K6 701 aaKnown RBP25.39■■□□□ 1.66
GGA2-205ENST00000563494 PCDHB15Q9Y5E8 787 aa25.39■■□□□ 1.66
GGA2-205ENST00000563494 USP17L15C9J2P7 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L13C9JLJ4 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L11C9JVI0 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L18D6R9N7 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L22D6RA61 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L17D6RBQ6 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L19D6RCP7 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L20D6RJB6 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 CAPN2P17655 700 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 USP17L24Q0WX57 530 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 TRIM32Q13049 653 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 MAP3K21Q5TCX8 1036 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 C12orf60Q5U649 245 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 GTF3C2Q8WUA4 911 aaPredicted RBP25.38■■□□□ 1.65
GGA2-205ENST00000563494 DYNLL2Q96FJ2 89 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 BCL11AQ9H165 835 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 CABP5Q9NP86 173 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 ECHDC1Q9NTX5 307 aa25.38■■□□□ 1.65
GGA2-205ENST00000563494 XRCC5P13010 732 aaKnown RBP25.37■■□□□ 1.65
GGA2-205ENST00000563494 ZYXQ15942 572 aaKnown RBP25.37■■□□□ 1.65
GGA2-205ENST00000563494 MORN1Q5T089 497 aa25.37■■□□□ 1.65
GGA2-205ENST00000563494 TRIB2Q92519 343 aa25.37■■□□□ 1.65
GGA2-205ENST00000563494 GCC1Q96CN9 775 aa25.37■■□□□ 1.65
GGA2-205ENST00000563494 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.37■■□□□ 1.653e-6■□□□□ 9.4
GGA2-205ENST00000563494 RABGAP1Q9Y3P9 1069 aa25.37■■□□□ 1.65
GGA2-205ENST00000563494 HMGCRP04035 888 aa25.36■■□□□ 1.65
GGA2-205ENST00000563494 HABP4Q5JVS0 413 aaKnown RBP25.36■■□□□ 1.65
GGA2-205ENST00000563494 KIAA1755Q5JYT7 1200 aa25.36■■□□□ 1.65
GGA2-205ENST00000563494 DEFB118Q96PH6 123 aa25.36■■□□□ 1.65
GGA2-205ENST00000563494 SWAP70Q9UH65 585 aa25.36■■□□□ 1.65
GGA2-205ENST00000563494 CEP290O15078 2479 aa25.36■■□□□ 1.65
GGA2-205ENST00000563494 MAPK4P31152 587 aa25.35■■□□□ 1.65
GGA2-205ENST00000563494 GPR142Q7Z601 462 aa25.35■■□□□ 1.65
GGA2-205ENST00000563494 CYP2D7A0A087X1C5 515 aa25.34■■□□□ 1.65
GGA2-205ENST00000563494 USP17L12C9JPN9 530 aa25.34■■□□□ 1.65
GGA2-205ENST00000563494 USP17L21D6R901 530 aa25.34■■□□□ 1.65
GGA2-205ENST00000563494 MNX1P50219 401 aaPredicted RBP25.34■■□□□ 1.65
GGA2-205ENST00000563494 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.34■■□□□ 1.653e-6■■□□□ 14.1
GGA2-205ENST00000563494 BTBD7Q9P203 1132 aa25.34■■□□□ 1.65
GGA2-205ENST00000563494 RPTORQ8N122 1335 aa25.34■■□□□ 1.65
GGA2-205ENST00000563494 MYH8P13535 1937 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 SPDYE16A6NNV3 312 aaPredicted RBP25.33■■□□□ 1.65
GGA2-205ENST00000563494 H0YGN5 161 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 CTR9Q6PD62 1173 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 TMEM179Q6ZVK1 233 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 C16orf86Q6ZW13 317 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 KBTBD3Q8NAB2 608 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 STRBPQ96SI9 672 aaKnown RBP25.33■■□□□ 1.65
GGA2-205ENST00000563494 FEZ1Q99689 392 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 NUDT12Q9BQG2 462 aa25.33■■□□□ 1.65
GGA2-205ENST00000563494 A0A0G2JMZ2 1700 aa25.32■■□□□ 1.64
GGA2-205ENST00000563494 IGHA2P01877 340 aa25.32■■□□□ 1.64
GGA2-205ENST00000563494 AKR1B1P15121 316 aa25.32■■□□□ 1.64
GGA2-205ENST00000563494 CYP2B6P20813 491 aa25.32■■□□□ 1.64
GGA2-205ENST00000563494 CDK8P49336 464 aa25.32■■□□□ 1.64
GGA2-205ENST00000563494 SOCS4Q8WXH5 440 aa25.32■■□□□ 1.64
GGA2-205ENST00000563494 PAGR1Q9BTK6 254 aa25.32■■□□□ 1.64
GGA2-205ENST00000563494 RPAP3Q9H6T3 665 aaPredicted RBP25.32■■□□□ 1.64
GGA2-205ENST00000563494 FARP2O94887 1054 aaPredicted RBP25.31■■□□□ 1.64
GGA2-205ENST00000563494 ZSCAN25Q6NSZ9 544 aa25.31■■□□□ 1.64
GGA2-205ENST00000563494 PLEKHH3Q7Z736 793 aa25.31■■□□□ 1.64
GGA2-205ENST00000563494 OSBP2Q969R2 916 aa25.31■■□□□ 1.64
GGA2-205ENST00000563494 COLQQ9Y215 455 aaPredicted RBP25.31■■□□□ 1.64
GGA2-205ENST00000563494 TMX2Q9Y320 296 aa25.31■■□□□ 1.64
GGA2-205ENST00000563494 GREB1LQ9C091 1923 aaPredicted RBP25.31■■□□□ 1.64
GGA2-205ENST00000563494 PARP14Q460N5 1801 aa25.3■■□□□ 1.64
GGA2-205ENST00000563494 GSG1L2A8MUP6 293 aa25.3■■□□□ 1.64
GGA2-205ENST00000563494 TSHZ3Q63HK5 1081 aa25.3■■□□□ 1.64
GGA2-205ENST00000563494 CLEC10AQ8IUN9 316 aa25.3■■□□□ 1.64
GGA2-205ENST00000563494 CCDC17Q96LX7 622 aa25.3■■□□□ 1.64
GGA2-205ENST00000563494 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.3■■□□□ 1.64
GGA2-205ENST00000563494 HMX1Q9NP08 348 aaPredicted RBP25.3■■□□□ 1.64
GGA2-205ENST00000563494 SLC4A4Q9Y6R1 1079 aa25.3■■□□□ 1.64
GGA2-205ENST00000563494 ALPK3Q96L96 1907 aa25.29■■□□□ 1.64
GGA2-205ENST00000563494 TFRCP02786 760 aaKnown RBP25.29■■□□□ 1.64
GGA2-205ENST00000563494 CCL14Q16627 93 aa25.29■■□□□ 1.64
GGA2-205ENST00000563494 PRO3102Q9H379 93 aa25.29■■□□□ 1.64
GGA2-205ENST00000563494 MPHOSPH10O00566 681 aaKnown RBP25.28■■□□□ 1.64
GGA2-205ENST00000563494 COG2Q14746 738 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms