RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 LMNB1P20700 586 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 GRK4P32298 578 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 EIF4A3P38919 411 aaKnown RBP5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 HSPA12BQ96MM6 686 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 MIPEPQ99797 713 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 ADAMTS1Q9UHI8 967 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 CTNND2Q9UQB3 1225 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 PCDHGB7Q9Y5F8 929 aa5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 ARID1BQ8NFD5 2236 aaPredicted RBP5.29□□□□□ -1.56
SHCBP1-202ENST00000563219 FAM221AA4D161 298 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 MINDY4BA8MYZ0 360 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 GREM1O60565 184 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 CST3P01034 146 aaPredicted RBP5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 ERCC5P28715 1186 aaPredicted RBP5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 ZNF746Q6NUN9 644 aaPredicted RBP5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 LETMD1Q6P1Q0 360 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 FBXL19Q6PCT2 694 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 FAM196AQ6ZSG2 479 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 ZSWIM9Q86XI8 627 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 MFSD4AQ8N468 514 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 ZNF296Q8WUU4 475 aaPredicted RBP5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 GATAD2BQ8WXI9 593 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 LRRC3Q9BY71 257 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 SUPT16HQ9Y5B9 1047 aaKnown RBP5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 ST14Q9Y5Y6 855 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 CAPN6Q9Y6Q1 641 aa5.28□□□□□ -1.56
SHCBP1-202ENST00000563219 CILPO75339 1184 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 FAM160A1Q05DH4 1040 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 SEPT6Q14141 434 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 SNAP47Q5SQN1 464 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 CDKAL1Q5VV42 579 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 PRAMEF13Q5VWM6 474 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 BNC2Q6ZN30 1099 aaPredicted RBP5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 KIAA0825Q8IV33 1275 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 GOLM1Q8NBJ4 401 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 COX4I2Q96KJ9 171 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 SPON2Q9BUD6 331 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 NT5C1AQ9BXI3 368 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 CCSER2Q9H7U1 834 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 CARS2Q9HA77 564 aaKnown RBP5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 ATP13A1Q9HD20 1204 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 FAM53CQ9NYF3 392 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 ROBO2Q9HCK4 1378 aa5.27□□□□□ -1.57
SHCBP1-202ENST00000563219 ZNF503-AS2A6NEH8 195 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 H3BS24 57 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 F13A1P00488 732 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 CYP7A1P22680 504 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 AFMP43652 599 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 RPL6Q02878 288 aaKnown RBP5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 MPP2Q14168 576 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 ZNF124Q15973 351 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 KCNMB1Q16558 191 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 FYB2Q5VWT5 728 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 DIEXFQ68CQ4 756 aaKnown RBP5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 THAP5Q7Z6K1 395 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 MRPL41Q8IXM3 137 aaKnown RBP5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 JARID2Q92833 1246 aaPredicted RBP5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 TJP2Q9UDY2 1190 aa5.26□□□□□ -1.57
SHCBP1-202ENST00000563219 LRRC10BA6NIK2 292 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 DBX1A6NMT0 343 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 CBX7O95931 251 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 PGRP06401 933 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 KIR3DL1P43629 444 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 GJA8P48165 433 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 MESP2Q0VG99 397 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 SLC6A19Q695T7 634 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 CDH24Q86UP0 819 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 KSR1Q8IVT5 923 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 RASGRP4Q8TDF6 673 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 XAGE3Q8WTP9 111 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 EAF1Q96JC9 268 aaPredicted RBP5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 FAM84AQ96KN4 292 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 ACBD3Q9H3P7 528 aa5.25□□□□□ -1.57
SHCBP1-202ENST00000563219 GDNFP39905 211 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 CRKP46108 304 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 ZC3H6P61129 1189 aaKnown RBP5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 PDE4BQ07343 736 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 PAK2Q13177 524 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 PKN1Q16512 942 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 MCATQ8IVS2 390 aaKnown RBP5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 BHLHE22Q8NFJ8 381 aaPredicted RBP5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 UBE2FQ969M7 185 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 TMEM87BQ96K49 555 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 C8orf37Q96NL8 207 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 SLC38A3Q99624 504 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 TINF2Q9BSI4 451 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 C19orf73Q9NVV2 129 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 ADAM30Q9UKF2 790 aa5.24□□□□□ -1.57
SHCBP1-202ENST00000563219 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 RBAK-RBAKDNI3L0D1 243 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 BPNT1O95861 308 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 GLI1P08151 1106 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 TNK2Q07912 1038 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 MLANAQ16655 118 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 CWF19L2Q2TBE0 894 aaKnown RBP5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 REC114Q7Z4M0 266 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 SLITRK4Q8IW52 837 aa5.23□□□□□ -1.57
SHCBP1-202ENST00000563219 SLC43A3Q8NBI5 491 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms